Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Merops_20nubicus_20[refseq_20GCF_5F000691845.1_202014-05-16] 53,499 sequences; 1,062,961,556 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq36225 127 4e-24 >seq36225 Length=28417 Score = 127 bits (140), Expect = 4e-24 Identities = 130/167 (78%), Gaps = 2/167 (1%) Strand=Plus/Minus Query 213528 GTGTACTCCATGATCTCGGTGCACAGGTTGCTGCATCGGATGGTGCCCAGGTTCTGGTGG 213587 |||||||||| |||||||||||| ||||||||||| |||||||||||||||||| ||| Sbjct 9957 GTGTACTCCACGATCTCGGTGCAGAGGTTGCTGCACTTGATGGTGCCCAGGTTCTGCTGG 9898 Query 213588 TTTGACTTTGCGTTGGCAGAA-TCCTTGTAGAGCATGTAGGGGGACCCGGTCTCTAGCTG 213646 || ||| ||| | |||| | |||||||||||||||||||||| |||||||| ||| Sbjct 9897 TTGCTCTT-GCGGTTGCAGGAGTCCTTGTAGAGCATGTAGGGGGTGCCGGTCTCGGTCTG 9839 Query 213647 GGACACCAGTATCTGGCTCCAGAGGTACCTGGCCTTGACCACCCGCC 213693 ||| | | || | |||||| | | ||| | ||||| |||| Sbjct 9838 CGACTCGATGATGGCGTACCAGAGCTGCTGCGCCCTCACCACGCGCC 9792 Score = 89.7 bits (98), Expect = 1e-12 Identities = 102/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 212915 TATCTGGAAGTCACCTGAGAGCACCCTCCTCTGGTAAAAGTTTGAAGTGTAGGGCTCGAT 212974 || ||| || || |||||||| || || | ||| | ||| |||||||||||||| Sbjct 14787 TACCTGAAACTCTCCTGAGAGGACTCTGCGTGTGTAGATGTTGCTGGTGTAGGGCTCGAT 14728 Query 212975 GCTCTCGTTGTTCCCCAGAATCTGTGCAGTGCTGGCTGTGGGCATGGGAGCCACCAGGAG 213034 | |||||||| ||||| ||||| |||||| ||||| |||||||| | | ||||| Sbjct 14727 GGATTCGTTGTTGCCCAGGATCTGAGCAGTGGAAGCTGTTGGCATGGGTGAAATGAGGAG 14668 Query 213035 ACTGTTCCTCACTCCGT 213051 |||||||| || |||| Sbjct 14667 GCTGTTCCTGACACCGT 14651 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 930909849084160