Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Merops_20nubicus_20[refseq_20GCF_5F000691845.1_202014-05-16]
53,499 sequences; 1,062,961,556 total letters
Query= NC_019495.1
Length=290304
Score E
Sequences producing significant alignments: (Bits) Value
seq36225 104 4e-17
seq26544 87.8 3e-12
>seq36225
Length=28417
Score = 104 bits (114), Expect = 4e-17
Identities = 101/130 (78%), Gaps = 0/130 (0%)
Strand=Plus/Minus
Query 221730 CCACCTCGTCCTTGTTGGTATACTGTATGATCTCTGTACAGAGGTTGCTGCACTTGATGG 221789
||||||| || ||| |||| |||| | |||||| || ||||||||||||||||||||||
Sbjct 9974 CCACCTCATCTTTGCTGGTGTACTCCACGATCTCGGTGCAGAGGTTGCTGCACTTGATGG 9915
Query 221790 TCCCCAGGTGATTGTGATTAGACTTGCGATTGGCAGCGTCCTTGTAGAGCATAAAGGGAC 221849
| ||||||| | || || |||||| ||| | ||||||||||||||| ||||
Sbjct 9914 TGCCCAGGTTCTGCTGGTTGCTCTTGCGGTTGCAGGAGTCCTTGTAGAGCATGTAGGGGG 9855
Query 221850 CGCCAGTCTC 221859
||| |||||
Sbjct 9854 TGCCGGTCTC 9845
>seq26544
Length=14703
Score = 87.8 bits (96), Expect = 3e-12
Identities = 97/127 (76%), Gaps = 2/127 (2%)
Strand=Plus/Minus
Query 25883 TGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCT 25942
|||| ||||||||||| || || |||||||| || ||||| ||||| || || || |
Sbjct 8303 TGGTTGCCTTTGCTGCAGTTGAAGGCATCTTCTTTTCGGGTTCCTTTGCTGCTATATTTT 8244
Query 25943 GGCTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTT-TCCAACGAGCTCATCAGCAGG 26001
|||| ||| ||| ||| ||||| || ||| ||||| ||||| || ||||| |||||
Sbjct 8243 GGCTGAAGAAGAGGGGCCTGATGCCTGGACTG-ACTTTCTCCAATGAACTCATTAGCAGA 8185
Query 26002 GACGAGG 26008
|| ||||
Sbjct 8184 GATGAGG 8178
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 928223646650560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |