Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Merops_20nubicus_20[refseq_20GCF_5F000691845.1_202014-05-16] 53,499 sequences; 1,062,961,556 total letters Query= NC_020474.2 Length=180421 Score E Sequences producing significant alignments: (Bits) Value seq16373 239 5e-58 seq51377 120 4e-22 seq25551 93.3 5e-14 >seq16373 Length=23388 Score = 239 bits (264), Expect = 5e-58 Identities = 647/987 (66%), Gaps = 5/987 (1%) Strand=Plus/Minus Query 160047 TGTCGCAGATGTTCGTCCAGACATTGGACGGCGAACACGTCAACGTCTTCGTCGAATTTA 160106 ||||||| || || |||| ||||| || || || ||| || || ||| || || Sbjct 12303 TGTCGCAAATACTCTTCCAAACATTTAACTGCAAAAGGGTCGACATCCGTGTCAAACTTG 12244 Query 160107 TTTGCGAACAGATGGTGAGCGTTCTGTAGGATCCAGTGCACGTCTCCGGACCCGAACACG 160166 || ||||| | ||||| ||| | || | ||||| || ||||||| ||| || || Sbjct 12243 TTAGCGAAGAAGTGGTG---GTTTCGCAGCACCCAGTTCAGGTCTCCGACCCCAAAAACA 12187 Query 160167 CAGACGGAACGTATGTGCACGCCGTTGCAAGGCGGGTACAGAGCTCCTTTCGCCACGTCA 160226 ||||| ||||| | ||| || || |||| || ||||| | || ||||| | |||||| Sbjct 12186 CAGACAGAACGAACGTGAACTCCACTGCATGGTGGGTAGGGTGCACCTTTGGACACGTCG 12127 Query 160227 CCTTCGTAGTACTGCCACTTCACAAACCTGGCTATCGCCTGCATGTCGGAGGTGTCGTAT 160286 || || ||||||||||||| ||||||||||| | || | |||||| || ||| || Sbjct 12126 CCCTCAAAGTACTGCCACTTGACAAACCTGGCCAGTGCATTCATGTCAGAAACGTCATAC 12067 Query 160287 TTGTACATCAG-GGGAACGGCACCGGGAACGCCGGGCATACGCTGTAGGGTGGCCCACAG 160345 |||| || || ||||| ||||| || || | | || | || | || |||||||| Sbjct 12066 TTGT-CACTAGAAGGAACTGCACCTGGGACTTCAGAGATTCTTTGAATTGTTGCCCACAG 12008 Query 160346 GTGTTCGTCGGGGCTGTACGTGTCCTTAGACCATTCCATGAACTCTCCGATTAACCTGTC 160405 || || || |||||||| ||||| || | ||| || ||||| | ||| ||| Sbjct 12007 GTACTCATCTGGGCTGTAAGTGTCTTTTGCCCACTCGATGAATTTAAGTATTTTGCTGCT 11948 Query 160406 CCGCAGAACGTGAGTAACGTAGGATCTGGTCACGACAAAGTACGCGCTGCCGGAGAATAT 160465 | | ||| || | ||| | || | ||| || || || || || || || Sbjct 11947 TTCTAATATGTGTTCTACAAATCTCCTGCTAACTATAAAATAGGCACTACCAGAAAAAAT 11888 Query 160466 CGGTATGGGTATAGGCGGCGTGTCTTTGTCCTGACCGGTGTTAGACACCACTCCTTTCAC 160525 || | | ||| ||| | |||||| || ||||| | || | || Sbjct 11887 TGGAGTACTGAGAGGTGGCAGTTGTTTGTCTATGCCTGTGTTCTTTATTTTACCATCAAC 11828 Query 160526 CAGCGCGTGTCGCTTCTTCCACCTGACCATCTTGTGCGGTGGCATGCGTTCCGTCTCTAG 160585 | | |||| | || |||||||| || || | | ||||| ||| || ||||| Sbjct 11827 AATCTCGTGGTGTTTTTTCCACCTTACTTCTTTATAAGCAGGCATTTTTTCTGTTTCTAG 11768 Query 160586 ACTGTTGGCACCGTCGAGCGATTTCAGCTGCTTGACGATCTCTAGGTTCGTCTTGAGCGG 160645 |||||| || | || | ||| | | || || || || |||| ||||| | || Sbjct 11767 ACTGTTTAAGCCTTTAAGGGCTTTTAATTTCTCTACCATTTCCTGGTTGGTCTTTATAGG 11708 Query 160646 AAAGTCGGTACCGCACAAGTTTATCACGTACTTCCATTTCGCGCTCAGGTCGTGCAGGTC 160705 |||||| | || || | |||||| | ||| ||||| | || || | || || || Sbjct 11707 AAAGTCCATGCCACAGAGGTTTATTAGGTATTTCCAGTGCGAACTTCGTCTGTAGAGATC 11648 Query 160706 CCTCATGCAATTAATATCTGCCTGCACGCGGCTCCAGGAAGCGTACACTACGTTCTCTAG 160765 ||||||| ||||||||||||||||| | |||||| ||||| ||||| || ||||||| Sbjct 11647 TTTCATGCAGTTAATATCTGCCTGCACCCTGCTCCATGAAGCATACACAACACTCTCTAG 11588 Query 160766 TTTACTGGCCACAAAGACGTTATCGAAACACGACACGATTCCCACCACCGCCAGAAAGAA 160825 | |||| | ||||| ||||| ||||| || || |||||| || || ||| || Sbjct 11587 CTGGCTGGAAATGAAGACATTATCAAAACATGAGACTATTCCCTTGACAGCAGCAAAAAA 11528 Query 160826 CATCTTATCCGCCTTTCGGTCCACGTGCACGCAATACAGGTTCTGAGGCGCGTAGATGGC 160885 | | | ||| ||| || || | ||| || | |||||||| || ||||| | Sbjct 11527 CGATTCTGGAGATTTTTTGTCAACATGAATGCAGTAAAAATTCTGAGGGGCATAGATTGA 11468 Query 160886 CCTGAGCAACCTCTCGAACATCTCTATCTTATGATGGATCACGATAGAGTAGGCTATCGG 160945 || || | || || | |||||| || || |||| | ||| || ||||| || || || Sbjct 11467 TCTTAGAAGTCTATCAAGCATCTCGATTTTGTGATAAACCACTATTGAGTAAGCAATTGG 11408 Query 160946 AAACTCGGTCTCCTCGCGACTCAGGGACCCGGTCAGGTACTTTCGCGTCTTGATAAAATA 161005 ||| || | || || | || || | | | | |||| | | |||||| | || | Sbjct 11407 AAATTCTGCTTCTTCACTGCTGAGAGGTTCCATAACGTACCTCCTAGTCTTGGTGAAGGA 11348 Query 161006 ATCACAATCCCGCGTCATGTTGATATA 161032 |||| || ||||||||| ||||| Sbjct 11347 GGCACAGTCTGCCGTCATGTTAATATA 11321 >seq51377 Length=985 Score = 120 bits (132), Expect = 4e-22 Identities = 521/807 (65%), Gaps = 39/807 (5%) Strand=Plus/Plus Query 160181 GTGCACGCCGTTGCAAGGCGGGTACAGAGCTCCTTTCGCCACGTCACCTTCGTAGTACTG 160240 |||| |||| |||| |||||||| | || || || ||| || || |||||| Sbjct 1 GTGCTGGCCGGTGCAGGGCGGGTAGGGCGCGCCCTTGCTGGTGTCTCCCTCCAGGTACTG 60 Query 160241 CCACTTCACAAACCTGGCTATCGCCTGCATGTCGGAGGTGTCGTATTTGTACATCAGGGG 160300 |||||| || | | || | || | |||||| ||| | ||| |||| || |||| Sbjct 61 CCACTTGACCAGGCGGGGCAGGGCATTCATGTCTGAGAGCTGGTACTTGTCGTTCTGGGG 120 Query 160301 AACGGCACCGGGAACGCCGGGCATACGCTGTAGGGTGGCCCACAGGTGTTCGTCGGGGCT 160360 || || || || || || ||||| || | ||||||||||| | ||| ||||| ||||| Sbjct 121 CACCGCGCCCGGCACACCCGGCATGCGGTTGAGGGTGGCCCAGACGTGCTCGTCAGGGCT 180 Query 160361 GTACGTGTCCTTAGACCATTCCATGAACT-CTCCGATTAACCTG----TCCCGCAGAACG 160415 ||| |||||||| | ||| || | ||||| || || | || || | || | | Sbjct 181 GTATGTGTCCTTGGCCCACTCGAGGAACTGCTGCG----CCGTGGGGTTCTCAAAG-ATG 235 Query 160416 TGAGTAACGTAGGATCTGGTCACGACAAAGTACGCGCTGCCGGAGAATAT-CGGTA--TG 160472 || ||| ||| | || || | | ||||||| |||| | || || |||| || Sbjct 236 TGCCGCACGAAGGCCCGTGTGACCAGGATGTACGCGTTGCCTGTAAACATGGGGTAGTTG 295 Query 160473 GGTATAGGCGGC-GTGTCTTTGT-CCTGACCG-GTGTTAGACACCACTCCTTTCACCAGC 160529 | |||||| | ||||||| || ||| | | | ||| | | |||| Sbjct 296 TGGGGTGGCGGCTCTTTCTTTGTGATTGTCCGAGAGATGGAC---------TCCCCCAGT 346 Query 160530 GCGTGTCGCTTCTTCCACCTGACCATCTTG--TGCGGTGGCATGCGTTCCGTCTCTAGAC 160587 |||| | | || ||| | || |||| || | || | | || | ||| | || Sbjct 347 TCGTGGTGGTACTGCCAGCGCTCCTGCTTGATGGCCGAGGGCTTC--TCTGACTCCATAC 404 Query 160588 TGTTGGCACCGTCGAGCGA-TTTCAGCTGCTTGACGATCTCTAGGTTCGTCTTGAGCGGA 160646 |||| || | ||| | ||| | ||| ||||||||| ||| ||||||| || Sbjct 405 TGTTCCGTCCCTGTAGCAACTTTAGGGTGC-GGACGATCTCGGCGTTGGTCTTGATGGGG 463 Query 160647 AAGTCGGTACCGCACAAGTTTATCACGTACTTCCATTTCGCGCTCAGGTC-GTG---CAG 160702 || ||||| ||||| ||| | | ||| ||| || || |||| | || ||| Sbjct 464 AAATCGGTGCCGCAGGTGTTAAGGAGGTAGCGCCA---CG-GCACAGGGCTCTGCAACAG 519 Query 160703 GTCCCTCATGCAATTAATATCTGCCTGCACGCGGCTCCAGGAAGCGTACACTACGTTCTC 160762 |||| |||||| || | || ||||||| ||| ||| || ||||| || || || || Sbjct 520 GTCCTGCATGCAGTTTAGGTCGGCCTGCAGCCGGGACCAAGAGGCGTAGACCACCTTTTC 579 Query 160763 TAGTTTACTGGCCACAAAGACGTTATCGAAACACGACACGATTCCCACCACCGCCAGAAA 160822 || |||||||||||||| || ||| || | |||||| || | ||| Sbjct 580 CAGGCGGCTGGCCACAAAGACATTGGGGAAGCAGGCCACGATGGCCCGTGCAGCCTCCTG 639 Query 160823 GAACATCTTATCCGCCTTTCGGTCCACGTGCACGCAATACAGGTTCTGAGGCGCGTAGAT 160882 ||| | | ||| | ||| | ||| ||||| || | |||||| || || |||| Sbjct 640 GAAGGTGGCTGGGGACTTGCTGTCAATGTGGACGCAGTAGATGTTCTGGGGGGCATAGAG 699 Query 160883 GGCCCTGAGCAACCTCTCGAACATCTCTATCTTATGATGGATCACGATAGAGTAGGCTAT 160942 |||||| || | || ||| |||||||| || || | ||||| || || |||||||| | Sbjct 700 GGCCCTCAGGAGCCGCTCAAACATCTCGATTTTGTCGTGGATGACCATGGAGTAGGCGAG 759 Query 160943 CGGAAACTCGGTCTCCTCGCGACTCAG 160969 || ||||| |||||| | ||||| Sbjct 760 GGGGAACTCCTCCTCCTCCTGGCTCAG 786 >seq25551 Length=85034 Score = 93.3 bits (102), Expect = 5e-14 Identities = 158/227 (70%), Gaps = 4/227 (2%) Strand=Plus/Minus Query 176201 GTAGATTGTGTTGTTTGTATCTAGTATATGTAGATATTTTACTAGGTCACGTGGCGAGTC 176260 ||| || |||| ||| | || || || | ||||||| | | || || || || ||| Sbjct 13632 GTACATCTTGTTATTTTTGTCAAGCATCAGAAGATATTCTGCCAGCTCTCGGGGGGAGAG 13573 Query 176261 ATAATCATTAACATGTATAAATGCGTGTGGTGGAATGTAGTTTTCATAATTTTGTCTGGA 176320 | |||| | |||||||| || | || || |||||||||||| ||||| |||| |||||| Sbjct 13572 AAAATCTTCCACATGTATGAAAGAGTCTGCTGGAATGTAGTTCTCATAGTTTTCTCTGGA 13513 Query 176321 GGGTCCTAAAACTATTGGTACGGTACGTGCTAATAATGAGC--GGTAGATCTTTTCTGAG 176378 || || | || | |||||| | | || | | |||| ||| | || || | Sbjct 13512 AGGGCCCAGTACAACTGGTACTGATCCAGCCA--GAAGAGCATTGTAAAGTTTCTCAGTA 13455 Query 176379 ATGTAGTCAGTGTGAATTGAGTTTTCAAAAGCTAAATAGAACTTACA 176425 ||||| || |||| ||||| |||||||||| | ||||| ||||| Sbjct 13454 ATGTAATCTTTGTGGATTGAATTTTCAAAAGAAAGGTAGAATTTACA 13408 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 576833191875240