Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Merops_20nubicus_20[refseq_20GCF_5F000691845.1_202014-05-16] 53,499 sequences; 1,062,961,556 total letters Query= NC_020864.1 Length=205622 Score E Sequences producing significant alignments: (Bits) Value seq48507 311 1e-79 seq51860 185 1e-41 seq30680 120 4e-22 seq245 84.2 3e-11 >seq48507 Length=51456 Score = 311 bits (344), Expect = 1e-79 Identities = 1026/1579 (65%), Gaps = 27/1579 (2%) Strand=Plus/Minus Query 195299 GCTATTGGTATCGATTTAGGAACTACTTACTCATGTGTTGGTGTATGGCAAAATGATCGT 195358 || || || ||||| | || || || ||||| || || ||||| | || ||| Sbjct 51364 GCAATCGGCATCGACCTGGGCACCACGTACTCCTGCGTGGGTGTCTTCCAGCATGGCAAA 51305 Query 195359 GTAGAGATTATCCCGAATGACCAAGGAAACCGTACAACTCCATCGTACGTTGCCTTTACA 195418 || ||||| ||| | |||||||| || ||||| || || || ||||| || || || Sbjct 51304 GTGGAGATCATCGCCAATGACCAGGGCAACCGCACCACGCCCAGCTACGTCGCGTTCACC 51245 Query 195419 GATAATGAACGTCTCGTTGGAGATGCCGCAAAAAATCAGACAGCTATGAACCCTATCAAT 195478 |||| || || ||| | || ||||| || || || ||| ||||||||||||| ||| Sbjct 51244 GATACCGAGCGCCTCATCGGTGATGCTGCCAAGAACCAGGTGGCTATGAACCCTACCAAC 51185 Query 195479 ACTGTCTTTGACGCGAAGCGTCTTATTGGTCGCAAGTTTTCGGATAAGAAAGTCCAAGAC 195538 || |||| || || |||||||| || || ||||||| | || | || ||| Sbjct 51184 ACCATCTTCGATGCTAAGCGTCTCATCGGCCGCAAGTATGACGACCCCACGGTGCAATCT 51125 Query 195539 GATATAAAGGACTGGTCTTATGAAGTTGTTCCCGGTGTGGCTGATAAGCCTATGATTAAT 195598 || || ||| ||||| | | || || || || || ||||| | | | | Sbjct 51124 GACATGAAGCACTGGCCCTTCCGTGTGGTGAA---TGAGGGTGGCAAGCCCAAGGTACAA 51068 Query 195599 GTTGAATTTCACGGTGAGAAGAAACAATTTGCTCCC-GAAGAAATTTCGTCTATGGTGTT 195657 || || | | ||||||| ||| | ||| |||| || || || || ||||| | Sbjct 51067 GTGGAGTACAAGGGTGAGATGAAG-ACTTTCTTCCCAGAGGAGATCAGCTCCATGGTCCT 51009 Query 195658 GATTAAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAGTTGT 195717 | ||||||||||||| || || | | |||| | ||| | |||| || | Sbjct 51008 CACCAAGATGAAGGAGATCGCTGAGGCCTATCTGGGGCGCAAGGTGCAGAATGCTGTCAT 50949 Query 195718 GACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTAT 195777 || || ||||||||||||| ||| || || || ||||| || || || || | | || Sbjct 50948 CACAGTGCCTGCTTACTTCAATGACTCCCAGCGCCAGGCCACCAAAGATGCCGGCACCAT 50889 Query 195778 TGCGGGTCTAAACTGTCTTA-GAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATG 195836 | || || || ||| | | |||||||| || || || || ||||| || || |||| Sbjct 50888 CACTGGCCTTAA-TGTGATGCGTATTATCAACGAGCCCACGGCAGCTGCTATCGCCTATG 50830 Query 195837 GTCTGGACAAGAA-----CAAGGAC-GAAGATAAAAATGTATTGATCTTTGATCTCGGTG 195890 | |||||||||| | || | | ||| || ||||| | |||||||| | || | Sbjct 50829 GCTTGGACAAGAAAGGTACTCGGGCTGGAGAGAAGAATGTGCTCATCTTTGACTTGGGAG 50770 Query 195891 GTGGTACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTA 195950 | || || |||||||| || | || | ||||| | ||| || ||||| || ||| | | Sbjct 50769 GGGGCACTTTTGATGTGTCCATCCTTACCATTGAGGATGGCATCTTCGAGGTGAAGTCCA 50710 Query 195951 CTGCTGGTGATACTCATCTAGGTGGTGAAGATTTCGATGCACGTCTTCTCCGTCATTTGT 196010 | ||||| || || || || ||||| || || || || || | | ||||| Sbjct 50709 CAGCTGGGGACACCCACCTGGGTGGGGAGGACTTTGACAACCGCATGGTGAACCATTTTG 50650 Query 196011 CTGATGAGTTCCGTCGAAAGAATAAGAAAGATATTTCTGGAAATCCTAGGGCTCTTCGTC 196070 || || ||| || ||| | ||| || || |||| || | || | | | Sbjct 50649 TGGAAGAATTCAAGCGCAAGCACAAGCGTGACATCGCTGGCAACAAGCGAGCGGTGAGGC 50590 Query 196071 GGCTTAGGACTGCATGTGAACGTGCCAAACGAACTCTCTCTTCTACGGCTCAAACAATGG 196130 | || | || || ||||| | || || || || ||| ||| | | ||| | | Sbjct 50589 GACTGCGTACGGCTTGTGAGAGGGCGAAGCGCACCCTCAGCTCTTCCACACAAGCTAGCA 50530 Query 196131 TTGAGATTGATTCGTTGTTTGACGGAATTGACTTCTATACAACTATTACCCGTGCACGTT 196190 |||||||||| || | | ||| || ||||||||||| || | ||||| ||||| || | Sbjct 50529 TTGAGATTGACTCCCTCTATGAGGGCATTGACTTCTACACCTCCATTACTCGTGCCCGCT 50470 Query 196191 TTGAAGAGTTAAACTCTGATTTGTTTAGGAAGTGTATGGAACCTGTTGAACAAGTACTTC 196250 | || ||| | || ||||| | || | |||| || || || | | || | Sbjct 50469 TCGAGGAGCTCAATGCTGATCTCTTCCGTGGCACCCTGGAGCCAGTGGAGAAGGCTCTGC 50410 Query 196251 GTGACGCAAAGATGGATAAGTCTAAGGTTGATGAAATTGTCCTTGTGGGAGGATCAACCC 196310 |||| || ||| | || ||| || | | || ||||| || ||||| || || |||| Sbjct 50409 GTGATGCCAAGCTAGACAAGGGCCAGATACAGGAGATTGTACTGGTGGGTGGCTCTACCC 50350 Query 196311 GTATTCCGAAGATTCAACAGATGCTTTCTAGCTTCTTCAATAATAAAGATTTAAACAAAA 196370 |||| || ||||| ||| || |||| |||||||||| ||||| | ||||| | Sbjct 50349 GTATCCCCAAGATCCAAAAGCTGCTGCAGGACTTCTTCAATGGCAAAGAGCTCAACAAGA 50290 Query 196371 CGATCAACCCGGATGAAGCAGTTGCTTATGGTGCGGCCGTTCAGGCTGCTATTCTCTCAG 196430 |||||||| ||||| || |||||||||||||| ||||| || || ||||| |||| Sbjct 50289 GCATCAACCCCGATGAGGCTGTTGCTTATGGTGCTGCCGTGCAAGCAGCTAT--CCTCAT 50232 Query 196431 GTGTTGACAA---TAATAACGTCCAAGATCTTCTGCTACTTGATGTTGCACCCGTATCCC 196487 | | ||||| | | || || ||||| || ||||| | ||||| | || | |||| Sbjct 50231 G-GGAGACAAGTCTGAGAATGTGCAAGACCTGCTGCTGTTGGATGTCACCCCTCTGTCCC 50173 Query 196488 TGGGTCTTGAAACAGCGGGTGGTGTTATGACTAAAATTATTGATAGGAACACAACTATTC 196547 |||| | || ||||| ||||| || ||||| | || | | ||||| || |||| Sbjct 50172 TGGGCATCGAGACAGCTGGTGGAGTGATGACCGCTCTCATCAAGCGCAACACCACCATTC 50113 Query 196548 CGACTAAGAAGGAACAAGTCTTTTCAACGTATTCCGATAATCA-ACCAGGTGTTCATATT 196606 | || || | || ||| | || || || || || || | || | || | | Sbjct 50112 CCACCAAACAAACTCAGACCTTCACCACCTACTCAGACAACCAGAGCA-GCGTCCTGGTC 50054 Query 196607 CAAGTATATGAAG--GAGAACGCTCCCGTG-CAAAGGATAACCATCTACTTGGAACTTTC 196663 || || || || | |||| ||| || | ||||| ||| | | || || | || Sbjct 50053 CAGGTGTACGAGGGTGAGAGGGCT---ATGACGAAGGACAACAACTTGCTGGGCAAATTT 49997 Query 196664 GATTTGACGGGGATTCCAGCTGCACCCAGAGGTGTTCCACAGATTAATGTTTGCTTCGAT 196723 || | ||||| || || | |||||| | || || || ||||| | || || || Sbjct 49996 GACCTAACGGGCATCCCCCCAGCACCCCGTGGAGTCCCCCAGATCGAGGTCACTTTTGAC 49937 Query 196724 ATAGACGCAAATGGAATTCTAAACGTCACAGCTGAGGACAAGGCTTCTGGCAAATCTGAA 196783 || || || || || || || || |||| || | ||||||| | || || | Sbjct 49936 ATCGATGCCAACGGTATCCTGAATGTCAGCGCCGTGGACAAGAGCACCGGTAAGGAGAAC 49877 Query 196784 AAGATTGTGATTACCAATGACAAGGGGCGGCTTTCTAAGGAGGAAATTGAACGTATGGTT 196843 ||||| || |||||||||||||| || || ||||| || || || || ||||| Sbjct 49876 AAGATCACCATCACCAATGACAAGGGTCGCCTGAGCAAGGACGACATCGACCGGATGGTG 49817 Query 196844 CAAGATGCGGAAAAGTACA 196862 ||||| || || || |||| Sbjct 49816 CAAGAAGCAGAGAAATACA 49798 >seq51860 Length=4005 Score = 185 bits (204), Expect = 1e-41 Identities = 168/212 (79%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| ||||||||||||||||| ||||| || || |||||||| || |||||| | Sbjct 3651 ATGCAGATCTTTGTGAAAACCCTGACTGGCAAGACAATCACCCTGGAAGTTGAGCCCAGT 3592 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||||| ||||| || | || |||||||| || || |||||||| || || ||||||||| Sbjct 3591 GACACCATCGAGAATGTGAAGGCCAAGATCCAGGACAAGGAAGGTATCCCCCCCGATCAG 3532 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 || | || || |||||||| || ||||| ||||||||||| ||||| | || |||||| Sbjct 3531 CAGAGGCTGATCTTTGCTGGCAAGCAGCTGGAAGATGGACGCACCCTGTCCGACTACAAC 3472 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCT 172073 | || |||||||| ||||| || ||||| || Sbjct 3471 ATCCAGAAGGAGTCCACTCTCCATCTTGTGCT 3440 Score = 172 bits (190), Expect = 7e-38 Identities = 175/228 (77%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| ||||||||||| ||||| ||||| || || |||||||| || |||||| | Sbjct 3423 ATGCAGATCTTTGTGAAGACCCTGACTGGCAAGACAATCACCCTGGAAGTTGAGCCCAGT 3364 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||||| || || || | || || ||||| || || |||||||| || || ||||||||| Sbjct 3363 GACACCATTGAGAATGTGAAGGCTAAGATCCAGGACAAGGAAGGTATCCCCCCCGATCAG 3304 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 || | || || |||||||| || ||||| ||||||||||| ||||| | || |||||| Sbjct 3303 CAGAGGCTGATCTTTGCTGGCAAGCAGCTGGAAGATGGACGCACCCTGTCCGACTACAAC 3244 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGT 172089 | || |||||||| ||||| || ||||| || | || | |||||| Sbjct 3243 ATCCAGAAGGAGTCCACTCTCCATCTTGTGCTGCGTCTGAGAGGTGGT 3196 Score = 158 bits (174), Expect = 2e-33 Identities = 162/212 (76%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| ||||| ||||| ||||| ||||| || || || ||||| || |||||| | Sbjct 3879 ATGCAGATCTTCGTGAAGACCCTAACTGGTAAGACCATTACCCTGGAAGTTGAGCCCAGT 3820 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||||| ||||| || | || |||||||| || || |||||||| || || ||||||||| Sbjct 3819 GACACCATCGAGAATGTGAAGGCCAAGATCCAGGACAAGGAAGGTATCCCCCCCGATCAG 3760 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 || | || || |||||||| || ||||| ||||||||||| ||||| | || |||||| Sbjct 3759 CAGAGGCTGATCTTTGCTGGCAAGCAGCTGGAAGATGGACGCACCCTGTCCGACTACAAC 3700 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCT 172073 | || ||||| || || || ||| | || || Sbjct 3699 ATCCAGAAGGAATCCACCCTGCACTTGGTGCT 3668 >seq30680 Length=3589 Score = 120 bits (132), Expect = 4e-22 Identities = 114/143 (80%), Gaps = 2/143 (1%) Strand=Plus/Minus Query 195708 ATGCAGTTGTGACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACG 195767 |||| |||||||||||||| || ||||||| ||||| || || ||||| ||||| || | Sbjct 2288 ATGCTGTTGTGACTGTACCAGCCTACTTCAACGATTCTCAGCGTCAGGCTACAAAAGATG 2229 Query 195768 CTGCTGCTATTGCGGGTCTAAACTGTCTTA-GAATTATCAATGAACCAACAGCGGCTGCA 195826 ||| ||||||| || || || |||| | |||| ||||| || |||||||| ||||| Sbjct 2228 CTGGAACTATTGCAGGGCTCAA-TGTCCTGCGAATCATCAACGAGCCAACAGCTGCTGCC 2170 Query 195827 ATTGCTTATGGTCTGGACAAGAA 195849 || || |||||||||||||| || Sbjct 2169 ATAGCCTATGGTCTGGACAAAAA 2147 Score = 95.1 bits (104), Expect = 2e-14 Identities = 145/204 (71%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 196607 CAAGTATATGAAGGAGAACGCTCCCGTG-CAAAGGATAACCATCTACTTGGAACTTTCGA 196665 || || |||||||||||||| | || || | ||||| ||| | | || || | || || Sbjct 649 CAGGTGTATGAAGGAGAACG-TGCCATGACCAAGGACAACAACTTGCTGGGCAAGTTTGA 591 Query 196666 TTTGACGGGGATTCCAGCTGCACCCAGAGGTGTTCCACAGATTAATGTTTGCTTCGATAT 196725 |||| || ||||| |||| ||||||||||| || |||||| | || ||||||||| Sbjct 590 GCTGACAGGTATTCCCCCTGCTCCCAGAGGTGTACCTCAGATTGAAGTAACCTTCGATAT 531 Query 196726 AGACGCAAATGGAATTCTAAACGTCACAGCTGAGGACAAGGCTTCTGGCAAATCTGAAAA 196785 || || ||||| || || || || | |||| ||| ||| ||||||| | || Sbjct 530 TGATGCCAATGGTATCCTGAATGTGTCTGCTGTGGATAAGAGCACTGGCAAGGAGAACAA 471 Query 196786 GATTGTGATTACCAATGACAAGGG 196809 ||| || || ||||||||||| Sbjct 470 GATCACCATCACAAATGACAAGGG 447 >seq245 Length=24968 Score = 84.2 bits (92), Expect = 3e-11 Identities = 79/98 (81%), Gaps = 2/98 (2%) Strand=Plus/Plus Query 195751 ACAGGCGACAAAGGACGCTGCTGCTATTGCGGGTCTAAACTGTCTT-AGAATTATCAATG 195809 |||||| ||||||||||||| ||||| || || | ||| || ||| | || |||| Sbjct 5416 ACAGGCTACAAAGGACGCTGGGCAGATTGCTGG-CTTGAATGTTTTGAGAGTGATTAATG 5474 Query 195810 AACCAACAGCGGCTGCAATTGCTTATGGTCTGGACAAG 195847 |||||||||| |||||| |||| ||||||||||||||| Sbjct 5475 AACCAACAGCAGCTGCACTTGCCTATGGTCTGGACAAG 5512 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 657422462743280