Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Merops_20nubicus_20[refseq_20GCF_5F000691845.1_202014-05-16]
53,499 sequences; 1,062,961,556 total letters
Query= NC_021858.1
Length=1908524
Score E
Sequences producing significant alignments: (Bits) Value
seq49771 179 5e-39
seq51126 176 5e-38
seq47488 176 5e-38
seq44154 176 5e-38
seq4553 138 1e-26
seq36225 134 2e-25
seq43608 104 3e-16
>seq49771
Length=28735
Score = 179 bits (198), Expect = 5e-39
Identities = 162/204 (79%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402
|| ||||||| || || ||| | ||| |||||||| ||||||||||| |||| | ||
Sbjct 14509 GCTTGGCCAGCTCCCCCGGCAGCAGCAGCCGCACGGCCGTCTGGATCTCCCGCGAGGTGA 14568
Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462
| ||| ||||||||| |||||||||| || ||||||| | ||||||| |||| |
Sbjct 14569 TGGTGGAGCGCTTGTTGTAGTGCGCCAGGCGCGAGGCCTCGCCGGCGATGCGCTCGAAGA 14628
Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522
||||||||||||| |||||||||| ||| | |||| |||||||||| ||||||||
Sbjct 14629 TGTCGTTGACAAAGGAGTTCATGATGCCCATGGCCTTGGAGGAGATGCCCGTGTCGGGGT 14688
Query 1254523 GCACCTGCTTGAGCACCTTGTAGA 1254546
|||||||||| ||||| |||||||
Sbjct 14689 GCACCTGCTTCAGCACTTTGTAGA 14712
>seq51126
Length=8989
Score = 176 bits (194), Expect = 5e-38
Identities = 160/202 (79%), Gaps = 0/202 (0%)
Strand=Plus/Plus
Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402
|| ||||||| |||||| ||| | ||| |||||||| ||||||||||| |||| | ||
Sbjct 8351 GCTTGGCCAGCTCGCCGGGCAGCAGCAGCCGCACGGCCGTCTGGATCTCCCGCGAGGTGA 8410
Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462
| || ||||||||| |||||||||| || ||||||| | ||||||| |||| |
Sbjct 8411 TGGTCGAGCGCTTGTTGTAGTGCGCCAGGCGCGAGGCCTCGCCGGCGATGCGCTCGAAGA 8470
Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522
||||||| || ||||||||||||| ||| | |||| ||||||||| ||||||||
Sbjct 8471 TGTCGTTCACGAACGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCCGTGTCGGGGT 8530
Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544
|||||||||| |||||||||||
Sbjct 8531 GCACCTGCTTCAGCACCTTGTA 8552
>seq47488
Length=1123
Score = 176 bits (194), Expect = 5e-38
Identities = 160/202 (79%), Gaps = 0/202 (0%)
Strand=Plus/Plus
Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402
|| ||||||| |||||| ||| | ||| |||||||| ||||||||||| |||| | ||
Sbjct 291 GCTTGGCCAGCTCGCCGGGCAGCAGCAGCCGCACGGCCGTCTGGATCTCCCGCGAGGTGA 350
Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462
| || ||||||||| |||||||||| || ||||||| | ||||||| |||| |
Sbjct 351 TGGTCGAGCGCTTGTTGTAGTGCGCCAGGCGCGAGGCCTCGCCGGCGATGCGCTCGAAGA 410
Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522
||||||| || ||||||||||||| ||| | |||| ||||||||| ||||||||
Sbjct 411 TGTCGTTCACGAACGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCCGTGTCGGGGT 470
Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544
|||||||||| |||||||||||
Sbjct 471 GCACCTGCTTCAGCACCTTGTA 492
>seq44154
Length=1721
Score = 176 bits (194), Expect = 5e-38
Identities = 160/202 (79%), Gaps = 0/202 (0%)
Strand=Plus/Plus
Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402
|| ||||||| |||||| ||| | ||| |||||||| ||||||||||| |||| | ||
Sbjct 1013 GCTTGGCCAGCTCGCCGGGCAGCAGCAGCCGCACGGCCGTCTGGATCTCCCGCGAGGTGA 1072
Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462
| || ||||||||| |||||||||| || ||||||| | ||||||| |||| |
Sbjct 1073 TGGTCGAGCGCTTGTTGTAGTGCGCCAGGCGCGAGGCCTCGCCGGCGATGCGCTCGAAGA 1132
Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522
||||||| || ||||||||||||| ||| | |||| ||||||||| ||||||||
Sbjct 1133 TGTCGTTCACGAACGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCCGTGTCGGGGT 1192
Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544
|||||||||| |||||||||||
Sbjct 1193 GCACCTGCTTCAGCACCTTGTA 1214
>seq4553
Length=6585
Score = 138 bits (152), Expect = 1e-26
Identities = 132/169 (78%), Gaps = 0/169 (0%)
Strand=Plus/Minus
Query 1254376 CGGCGGTCTGGATCTCGCGCGTGCCGATCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGC 1254435
|||| ||| |||| || |||| | ||| || ||||||||| |||||||||| ||
Sbjct 5840 CGGCCGTCAGGATGTCCCGCGAGGTGATGGTCGAGCGCTTGTTGTAGTGCGCCAGGCGCG 5781
Query 1254436 CGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATGACCGACATCG 1254495
||||||| | ||||||| |||| |||||||| || ||||||||||||| ||| |
Sbjct 5780 AGGCCTCGCCGGCGATGCGCTCGAAGATGTCGTTCACGAACGAGTTCATGATGCCCATGG 5721
Query 1254496 ACTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGTA 1254544
|||| ||||||||| |||||||||||||||||| |||||||||||
Sbjct 5720 CCTTGGACGAGATGCCCGTGTCGGGGTGCACCTGCTTCAGCACCTTGTA 5672
>seq36225
Length=28417
Score = 134 bits (148), Expect = 2e-25
Identities = 131/169 (78%), Gaps = 0/169 (0%)
Strand=Plus/Minus
Query 1628167 ACGATCTCGGTGCACAGGTTGGCCGACGTCGTCGTACCCAGGTTCTGCTGGTTGGTGGTC 1628226
|||||||||||||| |||||| || | | || |||||||||||||||||| | |
Sbjct 9948 ACGATCTCGGTGCAGAGGTTGCTGCACTTGATGGTGCCCAGGTTCTGCTGGTTGCTCTTG 9889
Query 1628227 AGGTTGACGGCGTCCTTGTGGAGCATGTAGGGCGCGCCGGTCTCGATCTGCGCCGCGACG 1628286
||||| || |||||||| |||||||||||| | |||||||||| |||||| | ||| |
Sbjct 9888 CGGTTGCAGGAGTCCTTGTAGAGCATGTAGGGGGTGCCGGTCTCGGTCTGCGACTCGATG 9829
Query 1628287 ATGGCCGACCAGATCTGGCGCGCGGGCACGACAGTCCGCGCGCGGCCCT 1628335
||||| |||||| ||| |||| ||| || |||||| |||||||
Sbjct 9828 ATGGCGTACCAGAGCTGCTGCGCCCTCACCACGCGCCGCGCCCGGCCCT 9780
Score = 102 bits (112), Expect = 1e-15
Identities = 80/96 (83%), Gaps = 0/96 (0%)
Strand=Plus/Minus
Query 1630182 GCCGATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGTTTGAGCGTGTCGTAGATGCC 1630241
||||||||| || || ||||||||||| ||||||||||| || || ||||||||||||||
Sbjct 6503 GCCGATGCCACCCGCAGACTTGGAGATCAGCGCGCACTGCTTCAGGGTGTCGTAGATGCC 6444
Query 1630242 CTCGATCGAGTCGGCCTTCATGTCCACGAGAAAGCA 1630277
|||||| |||| |||||||| || || |||||
Sbjct 6443 CTCGATGCTGTCGTCCTTCATGCACAGCAGGAAGCA 6408
>seq43608
Length=19049
Score = 104 bits (114), Expect = 3e-16
Identities = 92/115 (80%), Gaps = 0/115 (0%)
Strand=Plus/Minus
Query 869830 CACCTCCTCGGCGGTCCAGATCGAGGCCTCGGCCTTTTTGTACATCTCCCATACTTGCTG 869889
||||||||| || ||||||| || ||||||||||| |||||||||| ||| | | ||
Sbjct 118 CACCTCCTCCGCCGTCCAGAAGGAAGCCTCGGCCTTCTTGTACATCTGCCAGATATCGTG 59
Query 869890 GTAGCGGATAGGGAAGAGGACAAAGCGGTTGGGGTTGTCGCGCAACAGGGGTTCG 869944
||| |||| ||||||| ||| |||||| ||||||||| |||| ||| || |||
Sbjct 58 GTACTGGATGGGGAAGATGACGAAGCGGCGGGGGTTGTCCCGCAGCAGCGGCTCG 4
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 6102748821524183
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |