Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Merops_20nubicus_20[refseq_20GCF_5F000691845.1_202014-05-16] 53,499 sequences; 1,062,961,556 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq1167 95.1 9e-14 >seq1167 Length=43852 Score = 95.1 bits (104), Expect = 9e-14 Identities = 94/122 (77%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 131180 GTAGCCACAATAGCATTTGGTATGGGTATTAATAAACCGGATGTTAGAGTTGTTATTCAT 131239 ||||| ||| | |||||||| ||||| || || ||| | ||| | | | ||||||||| Sbjct 20042 GTAGCTACAGTGGCATTTGGAATGGGCATCAACAAAGCAGATATCCGGATGGTTATTCAT 19983 Query 131240 TACGGAGCTCCCAAGAATATTGAAGGTTATTATCAAGAAATTGGTAGAGCAGGTCGTGAT 131299 ||||| || || ||| | || ||| ||||| ||||| ||||| ||||| ||||||||| Sbjct 19982 TACGGTGCCCCTAAGGAGATGGAATCCTATTACCAAGAGATTGGGAGAGCTGGTCGTGAT 19923 Query 131300 GG 131301 || Sbjct 19922 GG 19921 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3738003825186774