Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Merops_20nubicus_20[refseq_20GCF_5F000691845.1_202014-05-16] 53,499 sequences; 1,062,961,556 total letters Query= NC_024303.1 Length=144898 Score E Sequences producing significant alignments: (Bits) Value seq1309 86.0 6e-12 >seq1309 Length=26931 Score = 86.0 bits (94), Expect = 6e-12 Identities = 123/171 (72%), Gaps = 2/171 (1%) Strand=Plus/Plus Query 21125 AGCATTTGGGGGCCTAGCTGCGATGGCTTAGATTGCATTGTTAAGCGGTGTGAACTGCCA 21184 ||||| ||||| || | || || ||| | ||| | |||||| |||| | | ||||| Sbjct 5724 AGCATATGGGGCCCAACATGTGACGGCCTGGATCGTATTGTTGAGCGTTTCAATATGCCA 5783 Query 21185 GAGCTTCAAGTGGGCGACTGGCTCATATTTGAAAACATGGGCGCTTACAGCTTGGTCAGC 21244 ||| | ||||| || |||||| || | |||||||||||||| || || | || |||| Sbjct 5784 GAGTTGCAAGTTGGTGACTGGATCCTCTTTGAAAACATGGGTGCCTATA-CTGTTGCAGC 5842 Query 21245 -TCTTCAACCTTTAACGGCTTCCCAAAGCCAGAAAAGCACTATGTTATTTC 21294 |||| ||||| || || |||| | |||| || |||||||| || || Sbjct 5843 AGCTTCTACCTTCAATGGATTCCAGAGGCCAACAATACACTATGTGATCTC 5893 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 463235609674320