Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Merops_20nubicus_20[refseq_20GCF_5F000691845.1_202014-05-16]
53,499 sequences; 1,062,961,556 total letters
Query= NC_024447.1
Length=282356
Score E
Sequences producing significant alignments: (Bits) Value
seq16767 123 5e-23
>seq16767
Length=29411
Score = 123 bits (136), Expect = 5e-23
Identities = 124/161 (77%), Gaps = 0/161 (0%)
Strand=Plus/Plus
Query 58379 GCATTATGGTGGTACTATATATCTAAAGGGATAGAATACTTAGATACAGTGTTTTTCATA 58438
|| ||||||||||| ||| | |||||||| || || || || |||||||| || |||||
Sbjct 18379 GCTTTATGGTGGTATTATGTCTCTAAAGGAATTGAGTATTTGGATACAGTATTCTTCATC 18438
Query 58439 CTTAGGAAAAAGTTTAATCATGTTAGCTTTCTACACGTATATCATCATTTTACTATGTTT 58498
|| ||||| || ||||| || | || || || || || ||||| ||||| || |||||
Sbjct 18439 CTGAGGAAGAAATTTAACCAAATCAGTTTCCTGCATGTCTATCACCATTTCACCATGTTC 18498
Query 58499 ACTTTAGGATGGGTAGGTATTAAATGGTTTGCAGGAGGTCA 58539
|| || | ||| | |||||||||||| ||||||| || ||
Sbjct 18499 ACGTTGTGGTGGATTGGTATTAAATGGGTTGCAGGTGGACA 18539
Score = 98.7 bits (108), Expect = 2e-15
Identities = 101/132 (77%), Gaps = 0/132 (0%)
Strand=Plus/Plus
Query 58541 GCATTTTTCGGCGCTCAGTTGAATTCTTTTATCCATGTTATTATGTATAGTTATTATGGT 58600
|| || ||||| |||||| ||||| | ||||| ||||| |||||||| | ||||||||
Sbjct 21109 GCTTTCTTCGGAGCTCAGATGAATGCGTTTATTCATGTCATTATGTACATGTATTATGGA 21168
Query 58601 ATGGCGGCGTGTGGACATATGTTTAAAAAGTATTTATGGTGGAAGCGTTACCTTACTATA 58660
| || || ||||| | || ||| | ||||| | |||||||| || ||| | || |||
Sbjct 21169 TTAGCTGCCTGTGGCCCTAAATTTCAGAAGTACCTGTGGTGGAAACGATACTTGACCATA 21228
Query 58661 ATGCAATTGGTA 58672
|||||||||||
Sbjct 21229 TTGCAATTGGTA 21240
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 902807055052640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |