Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Merops_20nubicus_20[refseq_20GCF_5F000691845.1_202014-05-16]
53,499 sequences; 1,062,961,556 total letters
Query= NC_024696.1
Length=180800
Score E
Sequences producing significant alignments: (Bits) Value
seq16373 190 2e-43
seq25551 134 2e-26
>seq16373
Length=23388
Score = 190 bits (210), Expect = 2e-43
Identities = 643/992 (65%), Gaps = 17/992 (2%)
Strand=Plus/Minus
Query 162067 TTATGTCGGAGATACTCGTCTAGACACTGGACCGCGAACACGTCTCGTTCCTCATCGAAC 162126
|||||||| | |||||| || | ||| | || || || ||| ||| || |||
Sbjct 12306 TTATGTCGCAAATACTCTTCCAAACATTTAACTGCAAAAGGGTCGACATCCGTGTCAAAC 12247
Query 162127 TTGTTCGCGAACAGGTGATGCGAGTTCTTCAATATCCAATTAAGATCCCCCGATCCGAAC 162186
||||| ||||| | ||| || ||| || | ||| || || || || || ||
Sbjct 12246 TTGTTAGCGAAGAAGTGGTG---GTTTCGCAGCACCCAGTTCAGGTCTCCGACCCCAAAA 12190
Query 162187 ACGCACACGGACCGCACGTGCACGCCGCTGCACGGCGGATACAGGGCCCCATCGTCCACA 162246
|| || || || || ||||| || || ||||| || || || | || || | | |||
Sbjct 12189 ACACAGACAGAACGAACGTGAACTCCACTGCATGGTGGGTAGGGTGCACCTTTGGACACG 12130
Query 162247 TCCCCCTCGTAGTATTGCCACTTAACGAACCTAGTGATAGCCTGCATGTCGGAGGTGTCG 162306
|| ||||| |||| |||||||| || ||||| | | || | |||||| || |||
Sbjct 12129 TCGCCCTCAAAGTACTGCCACTTGACAAACCTGGCCAGTGCATTCATGTCAGAAACGTCA 12070
Query 162307 TACTTGTACACT-GACGGCACGGCTCCAGGAACACCCGGCAGTCTCTGTAGAGTAGCCCA 162365
||||||| |||| || || || || || || || | | | ||| || | || |||||
Sbjct 12069 TACTTGT-CACTAGAAGGAACTGCACCTGGGACTTCAGAGATTCTTTGAATTGTTGCCCA 12011
Query 162366 CAGGTGTTCGTCTGGACTATACGTCTCCTTCGACCACTCCATGAACTCCCTGACCGTTTT 162425
||||| || ||||| || || || || || | |||||| ||||| | | | ||||
Sbjct 12010 CAGGTACTCATCTGGGCTGTAAGTGTCTTTTGCCCACTCGATGAATT---TAAGTATTTT 11954
Query 162426 ATCG---TATAGAATGTAAGAGACGTAGGACCTGGTCACAATAAAGTACGCGCTACCAGA 162482
| | || |||| || | |||| | || ||||| || || ||||||||
Sbjct 11953 GCTGCTTTCTAATATGTGTTCTACAAATCTCCTGCTAACTATAAAATAGGCACTACCAGA 11894
Query 162483 AAACACGGGTATGCGTATAGGAGGGGGCTCTTTGTCTTGACCCGTGTTGACTACCATTCC 162542
||| | || | | | ||| || | | ||||||| || ||||| || | ||
Sbjct 11893 AAAAATTGGAGTACTGAGAGGTGGCAGTTGTTTGTCTATGCCTGTGTTCTTTATTTTACC 11834
Query 162543 CTCTACGACCACGTGTCTCTTCCTCCACCTGGCCATCTTACTGGTAGACGGGTGTTCGGT 162602
|| || | | |||| || ||||||| | ||| | || | | ||| ||
Sbjct 11833 ATCAACAATCTCGTGGTGTTTTTTCCACCTTACTTCTTTATAAGCAGGCATTTTTTCTGT 11774
Query 162603 CTCTAGACTGTTACGACCCCCCAAGGCCTTCAGCTGACGC-ACCATCTCTAGATTGGTCT 162661
||||||||||| | || |||| ||| | | | ||||| || | |||||||
Sbjct 11773 TTCTAGACTGTTTA-AGCCTTTAAGGGCTTTTAATTTCTCTACCATTTCCTGGTTGGTCT 11715
Query 162662 TAAGGGGAAAGTCGGTGCCGCAGAGATTAATAACATATTTCCACTTAACGCTGAGTCCGT 162721
| | |||||||| |||| ||||| || || | |||||||| | || ||| ||
Sbjct 11714 TTATAGGAAAGTCCATGCCACAGAGGTTTATTAGGTATTTCCAGTGCGAACTTCGTCTGT 11655
Query 162722 ACAGATCCTGTAGACAGTTCAGATCGGCCTGGACGCGACTCCACGACGCGTACACGACGC 162781
| ||||| | | ||||| | ||| ||||| || | ||||| || || ||||| || |
Sbjct 11654 AGAGATCTTTCATGCAGTTAATATCTGCCTGCACCCTGCTCCATGAAGCATACACAACAC 11595
Query 162782 TCTCCAACCTAGTGGCGACAAAGACATTGTCGAAACACGAAACTATCCCCATCACGGCCA 162841
|||| | | ||| | |||||||| || ||||| || ||||| ||| | || ||
Sbjct 11594 TCTCTAGCTGGCTGGAAATGAAGACATTATCAAAACATGAGACTATTCCCTTGACAGCAG 11535
Query 162842 GTGAGAACA--TCGGGTCCGCTTTCCTATCTACGTGTACGCAGTATAGATTCTGAGGGGC 162899
| ||| || || | ||| | || || || | |||||| | ||||||||||||
Sbjct 11534 CAAAAAACGATTCTGGA--GATTTTTTGTCAACATGAATGCAGTAAAAATTCTGAGGGGC 11477
Query 162900 GTAGATGGCCCTCAGTAATCTCTCGAACATCTCTATCTTATGGTGTACCACGATAGAATA 162959
||||| | || || | ||| || | |||||| || || || | ||||| || || ||
Sbjct 11476 ATAGATTGATCTTAGAAGTCTATCAAGCATCTCGATTTTGTGATAAACCACTATTGAGTA 11417
Query 162960 CGCTATGGGGAACTCAGCCTCCTCGCGACTGAGAGACCCTGTAAAGTACTTGCGGTCCCT 163019
|| || || || || || || || | ||||||| | ||| |||| | | | |
Sbjct 11416 AGCAATTGGAAATTCTGCTTCTTCACTGCTGAGAGGTTCCATAACGTACCTCCTAGTCTT 11357
Query 163020 CACAAACGCCGCACAGTCCTCCGTCATGTTAA 163051
|| | |||||||| ||||||||||||
Sbjct 11356 GGTGAAGGAGGCACAGTCTGCCGTCATGTTAA 11325
>seq25551
Length=85034
Score = 134 bits (148), Expect = 2e-26
Identities = 382/578 (66%), Gaps = 13/578 (2%)
Strand=Plus/Minus
Query 176975 CACGTGAATGAAAGCGTCTCCCGGGACGTAATTTTCGTAATTCTCTCTCGATGTTCCGAG 177034
||| || ||||||| |||| | || | ||| || || || || ||||| || | || ||
Sbjct 13563 CACATGTATGAAAGAGTCTGCTGGAATGTAGTTCTCATAGTTTTCTCTGGAAGGGCCCAG 13504
Query 177035 TACTATGGGTACCGCACCTGCCATAAGAGATCGGTAGAGTTTTTCGGTAATATAGTCCCT 177094
||| | ||||| | || |||| ||||| ||| ||||| || ||||| || || |
Sbjct 13503 TACAACTGGTACTGATCCAGCCAGAAGAGCATTGTAAAGTTTCTCAGTAATGTAATCTTT 13444
Query 177095 GTGTACGGAGTTCTCAAACGCGAGATAGAATTTACAG--GAAGATAGTAGCGGGATGAAG 177152
||| | || || ||||| | || ||||||||||| | ||||||| | | || |||
Sbjct 13443 GTGGATTGAATTTTCAAAAGAAAGGTAGAATTTACAACTGGAGATAGTTG--GAATCAAG 13386
Query 177153 TCATCATCGGGTATATAATCTCCTACTACGTTCCCGTATACATGTATATCTATGTGTTTA 177212
| | ||| | ||| ||||| | | | ||||| ||| || || | || |||
Sbjct 13385 TTTTTATCATTGACATAGTCTCCAAAGGCTTGTCCGTAGGTATGGATTTCGACGTATTTG 13326
Query 177213 CTGAGCTCTAGGTAGTATCTCGA-TCTCACGTGGTCGTTGTTCCAATTGCTGACGACCCA 177271
|| ||||| ||| || || || || | || || |||||| || || || |||||
Sbjct 13325 CTAAGCTCATTGTAATA-CTTGACTCGAGCATGCTCAGGGTTCCAGTTACTAACAACCCA 13267
Query 177272 GCAAACTAACTTGCTCTTTGCGGGAACGGGATTCGATACTAATGCAGTGTCT-CTGAGCG 177330
|| || || || ||| || || ||| | ||| | | | | | || |
Sbjct 13266 ACATACCAAGTTTTCCTTACTTGGCAC----TTCAAATGTAAAGGAACCTGTACCGACCA 13211
Query 177331 TTAGTGATCCATAGGGCACGTGAATATCCGAGTCGCGTCTGTACGTTAACGTGAGATTGA 177390
| | | ||||| ||||| |||||||| || || |||| ||| || | || || || |
Sbjct 13210 TCATGAAGCCATAAGGCACCTGAATATCTGAATCACGTCGGTAAGTCAGGGTCAGGTTAA 13151
Query 177391 AAAGGTTTTCTATACCT-TGTTTGAAGGGGCTGTTACTGGGCGATTCTAAGTTCATCCAT 177449
| |||| ||| || || | ||| || | | | | | || || || |||||||||||
Sbjct 13150 AGAGGTGTTCAATGCCACTCTTTTGTGGAG-TATGAGTTGGAGACTCCAAGTTCATCCAA 13092
Query 177450 ATCCACTTTTGAAAGGTTGGTCTGGGTTCCGTAGGTAGAGTATAAGGATCTATACTTATC 177509
|||||||| || || | ||| |||| || | ||||| | || |||| || ||
Sbjct 13091 ATCCACTTCTGGAATGGTGGCCTGGCTTGCTGAGGTAAATTAGTCAGATCCCAGCTAATG 13032
Query 177510 TCTCTGTGGTGAAAGACTACGGCATTGGCTTTGTAATA 177547
|||||||| |||| || || |||| || ||||| |||
Sbjct 13031 TCTCTGTGATGAATGAGAACAGCATGGGATTTGTTATA 12994
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 578045180830400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |