Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Merops_20nubicus_20[refseq_20GCF_5F000691845.1_202014-05-16] 53,499 sequences; 1,062,961,556 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq44154 203 5e-46 seq49771 201 2e-45 seq51126 197 2e-44 seq47488 197 2e-44 seq4553 159 5e-33 seq36225 122 1e-21 seq43608 100 4e-15 >seq44154 Length=1721 Score = 203 bits (224), Expect = 5e-46 Identities = 192/244 (79%), Gaps = 6/244 (2%) Strand=Plus/Minus Query 724899 TACTCGTCCTTTATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCC 724958 |||||| || | | ||||||||||| ||||||||||||||| || || |||| Sbjct 1229 TACTCGATCTATGTGTACAAGGTGCTGAAGCAGGTGCACCCCGACAC-----GGGCATC- 1176 Query 724959 TCCAACAAGTCCATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGC 725018 || |||| ||||| |||||||||||||| || |||||||| |||| ||||||| | Sbjct 1175 TCGTCCAAGGCCATGGGCATCATGAACTCGTTCGTGAACGACATCTTCGAGCGCATCGCC 1116 Query 725019 ACCGAGGCCGGTCGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATC 725078 ||||||| |||||||||| || |||||||||| || ||| | |||| |||||| Sbjct 1115 GGCGAGGCCTCGCGCCTGGCGCACTACAACAAGCGCTCGACCATCACCTCGCGGGAGATC 1056 Query 725079 CAGACCGCCGTGCGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGC 725138 ||||| |||||||| ||| | ||| |||||| ||||||| ||||||||||||||||||| Sbjct 1055 CAGACGGCCGTGCGGCTGCTGCTGCCCGGCGAGCTGGCCAAGCACGCCGTCTCCGAGGGC 996 Query 725139 ACCA 725142 |||| Sbjct 995 ACCA 992 >seq49771 Length=28735 Score = 201 bits (222), Expect = 2e-45 Identities = 184/231 (80%), Gaps = 6/231 (3%) Strand=Plus/Minus Query 724912 TCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCA 724971 ||||||| ||||| ||||||||||||||| || || |||| ||| |||| ||| Sbjct 14712 TCTACAAAGTGCTGAAGCAGGTGCACCCCGACAC-----GGGCATC-TCCTCCAAGGCCA 14659 Query 724972 TGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTC 725031 || ||||||||||| |||||||||||||| |||| ||||||| | ||||||| | Sbjct 14658 TGGGCATCATGAACTCCTTTGTCAACGACATCTTCGAGCGCATCGCCGGCGAGGCCTCGC 14599 Query 725032 GCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGC 725091 ||||||||| || |||||||||| ||| ||| | |||| ||||||||||| ||||||| Sbjct 14598 GCCTGGCGCACTACAACAAGCGCTCCACCATCACCTCGCGGGAGATCCAGACGGCCGTGC 14539 Query 725092 GCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 | ||| | ||| || || ||||||| ||||||||||||||||||||||| Sbjct 14538 GGCTGCTGCTGCCGGGGGAGCTGGCCAAGCACGCCGTCTCCGAGGGCACCA 14488 >seq51126 Length=8989 Score = 197 bits (218), Expect = 2e-44 Identities = 182/229 (79%), Gaps = 6/229 (3%) Strand=Plus/Minus Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973 ||||||||||| ||||||||||||||| || || |||| || |||| ||||| Sbjct 8552 TACAAGGTGCTGAAGCAGGTGCACCCCGACAC-----GGGCATC-TCGTCCAAGGCCATG 8499 Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033 |||||||||||||| || |||||||| |||| ||||||| | ||||||| ||| Sbjct 8498 GGCATCATGAACTCGTTCGTGAACGACATCTTCGAGCGCATCGCCGGCGAGGCCTCGCGC 8439 Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093 ||||||| || |||||||||| || ||| | |||| ||||||||||| |||||||| Sbjct 8438 CTGGCGCACTACAACAAGCGCTCGACCATCACCTCGCGGGAGATCCAGACGGCCGTGCGG 8379 Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 ||| | ||| |||||| ||||||| ||||||||||||||||||||||| Sbjct 8378 CTGCTGCTGCCCGGCGAGCTGGCCAAGCACGCCGTCTCCGAGGGCACCA 8330 >seq47488 Length=1123 Score = 197 bits (218), Expect = 2e-44 Identities = 182/229 (79%), Gaps = 6/229 (3%) Strand=Plus/Minus Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973 ||||||||||| ||||||||||||||| || || |||| || |||| ||||| Sbjct 492 TACAAGGTGCTGAAGCAGGTGCACCCCGACAC-----GGGCATC-TCGTCCAAGGCCATG 439 Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033 |||||||||||||| || |||||||| |||| ||||||| | ||||||| ||| Sbjct 438 GGCATCATGAACTCGTTCGTGAACGACATCTTCGAGCGCATCGCCGGCGAGGCCTCGCGC 379 Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093 ||||||| || |||||||||| || ||| | |||| ||||||||||| |||||||| Sbjct 378 CTGGCGCACTACAACAAGCGCTCGACCATCACCTCGCGGGAGATCCAGACGGCCGTGCGG 319 Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 ||| | ||| |||||| ||||||| ||||||||||||||||||||||| Sbjct 318 CTGCTGCTGCCCGGCGAGCTGGCCAAGCACGCCGTCTCCGAGGGCACCA 270 >seq4553 Length=6585 Score = 159 bits (176), Expect = 5e-33 Identities = 175/229 (76%), Gaps = 8/229 (3%) Strand=Plus/Plus Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973 ||||||||||| ||||||||||||||| || || |||| || |||| ||||| Sbjct 5672 TACAAGGTGCTGAAGCAGGTGCACCCCGACAC-----GGGCATC-TCGTCCAAGGCCATG 5725 Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033 |||||||||||||| || |||||||| |||| ||||||| | ||||||| ||| Sbjct 5726 GGCATCATGAACTCGTTCGTGAACGACATCTTCGAGCGCATCGCCGGCGAGGCCTCGCGC 5785 Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093 ||||||| || |||||||||| || ||| | |||| || |||| ||| |||| | | Sbjct 5786 CTGGCGCACTACAACAAGCGCTCGACCATCACCTCGCGGGACATCCTGACGGCCG-GGGA 5844 Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 | | ||| |||| | ||||||| ||||||||||||||||||||||| Sbjct 5845 AAAAAC-TGCCCGGCTAGCTGGCCAAGCACGCCGTCTCCGAGGGCACCA 5892 >seq36225 Length=28417 Score = 122 bits (134), Expect = 1e-21 Identities = 125/161 (78%), Gaps = 2/161 (1%) Strand=Plus/Plus Query 262068 CGCGGACCGTCGTGCCCGCACGACAGATCTGGTCGGCCATTGTCGCGGCCCATATCGAGA 262127 ||||| ||| ||| || | ||| |||||| ||||| ||| | | || | ||||| Sbjct 9789 CGCGGCGCGTGGTGAGGGCGCAGCAGCTCTGGTACGCCATCATCGAGTCGCAGACCGAGA 9848 Query 262128 CCGGCACGCCCTACATGGTCTACAAGGACGCCGTCAACCTGACCAGCAACCAGCAGAACC 262187 ||||||| ||||||||| ||||||||||| || ||||| | |||||||||||||||| Sbjct 9849 CCGGCACCCCCTACATGCTCTACAAGGACTCCTGCAACCGCAAGAGCAACCAGCAGAACC 9908 Query 262188 TGGGCACCACGACAGAG-GCCAACCTGTGCACCGAGATCGT 262227 ||||||||| | || | |||||| |||||||||||||| Sbjct 9909 TGGGCACCATCA-AGTGCAGCAACCTCTGCACCGAGATCGT 9948 Score = 95.1 bits (104), Expect = 2e-13 Identities = 78/95 (82%), Gaps = 0/95 (0%) Strand=Plus/Plus Query 259970 TGCTTTCTGTTGGACATGAAGGCCGATTCGATCGAGGGCATCTATGACACGCTCAAGCAG 260029 ||||| ||| || |||||||| ||| |||||||||||||| ||||| || |||||| Sbjct 6408 TGCTTCCTGCTGTGCATGAAGGACGACAGCATCGAGGGCATCTACGACACCCTGAAGCAG 6467 Query 260030 TGCGCGCTCATCTCCAAGGCGGCCGGCGGCATCGG 260064 |||||||| ||||||||| | || || |||||||| Sbjct 6468 TGCGCGCTGATCTCCAAGTCTGCGGGTGGCATCGG 6502 >seq43608 Length=19049 Score = 100 bits (110), Expect = 4e-15 Identities = 92/115 (80%), Gaps = 1/115 (1%) Strand=Plus/Plus Query 1455715 CGAGCCGCTGCTGCGCGATAACCCGAACCGCTTTGTCCTGTTCCCCATCCGCTACCAGCG 1455774 ||||||||||||||| || ||||| |||||| ||| | |||||||||| ||||| Sbjct 4 CGAGCCGCTGCTGCGGGACAACCCCCGCCGCTTCGTCATCTTCCCCATCCAGTACCACGA 63 Query 1455775 GATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGT 1455829 || ||| | ||||| ||| ||||||||||| ||||| ||||| || |||||||| Sbjct 64 TATCTGGCAGATGTA-CAAGAAGGCCGAGGCTTCCTTCTGGACGGCGGAGGAGGT 117 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7172651123118838