Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Merops_20nubicus_20[refseq_20GCF_5F000691845.1_202014-05-16]
53,499 sequences; 1,062,961,556 total letters
Query= NC_026440.1
Length=2243109
Score E
Sequences producing significant alignments: (Bits) Value
seq44154 203 5e-46
seq49771 201 2e-45
seq51126 197 2e-44
seq47488 197 2e-44
seq4553 159 5e-33
seq36225 122 1e-21
seq43608 100 4e-15
>seq44154
Length=1721
Score = 203 bits (224), Expect = 5e-46
Identities = 192/244 (79%), Gaps = 6/244 (2%)
Strand=Plus/Minus
Query 724899 TACTCGTCCTTTATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCC 724958
|||||| || | | ||||||||||| ||||||||||||||| || || ||||
Sbjct 1229 TACTCGATCTATGTGTACAAGGTGCTGAAGCAGGTGCACCCCGACAC-----GGGCATC- 1176
Query 724959 TCCAACAAGTCCATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGC 725018
|| |||| ||||| |||||||||||||| || |||||||| |||| ||||||| |
Sbjct 1175 TCGTCCAAGGCCATGGGCATCATGAACTCGTTCGTGAACGACATCTTCGAGCGCATCGCC 1116
Query 725019 ACCGAGGCCGGTCGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATC 725078
||||||| |||||||||| || |||||||||| || ||| | |||| ||||||
Sbjct 1115 GGCGAGGCCTCGCGCCTGGCGCACTACAACAAGCGCTCGACCATCACCTCGCGGGAGATC 1056
Query 725079 CAGACCGCCGTGCGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGC 725138
||||| |||||||| ||| | ||| |||||| ||||||| |||||||||||||||||||
Sbjct 1055 CAGACGGCCGTGCGGCTGCTGCTGCCCGGCGAGCTGGCCAAGCACGCCGTCTCCGAGGGC 996
Query 725139 ACCA 725142
||||
Sbjct 995 ACCA 992
>seq49771
Length=28735
Score = 201 bits (222), Expect = 2e-45
Identities = 184/231 (80%), Gaps = 6/231 (3%)
Strand=Plus/Minus
Query 724912 TCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCA 724971
||||||| ||||| ||||||||||||||| || || |||| ||| |||| |||
Sbjct 14712 TCTACAAAGTGCTGAAGCAGGTGCACCCCGACAC-----GGGCATC-TCCTCCAAGGCCA 14659
Query 724972 TGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTC 725031
|| ||||||||||| |||||||||||||| |||| ||||||| | ||||||| |
Sbjct 14658 TGGGCATCATGAACTCCTTTGTCAACGACATCTTCGAGCGCATCGCCGGCGAGGCCTCGC 14599
Query 725032 GCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGC 725091
||||||||| || |||||||||| ||| ||| | |||| ||||||||||| |||||||
Sbjct 14598 GCCTGGCGCACTACAACAAGCGCTCCACCATCACCTCGCGGGAGATCCAGACGGCCGTGC 14539
Query 725092 GCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142
| ||| | ||| || || ||||||| |||||||||||||||||||||||
Sbjct 14538 GGCTGCTGCTGCCGGGGGAGCTGGCCAAGCACGCCGTCTCCGAGGGCACCA 14488
>seq51126
Length=8989
Score = 197 bits (218), Expect = 2e-44
Identities = 182/229 (79%), Gaps = 6/229 (3%)
Strand=Plus/Minus
Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973
||||||||||| ||||||||||||||| || || |||| || |||| |||||
Sbjct 8552 TACAAGGTGCTGAAGCAGGTGCACCCCGACAC-----GGGCATC-TCGTCCAAGGCCATG 8499
Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033
|||||||||||||| || |||||||| |||| ||||||| | ||||||| |||
Sbjct 8498 GGCATCATGAACTCGTTCGTGAACGACATCTTCGAGCGCATCGCCGGCGAGGCCTCGCGC 8439
Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093
||||||| || |||||||||| || ||| | |||| ||||||||||| ||||||||
Sbjct 8438 CTGGCGCACTACAACAAGCGCTCGACCATCACCTCGCGGGAGATCCAGACGGCCGTGCGG 8379
Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142
||| | ||| |||||| ||||||| |||||||||||||||||||||||
Sbjct 8378 CTGCTGCTGCCCGGCGAGCTGGCCAAGCACGCCGTCTCCGAGGGCACCA 8330
>seq47488
Length=1123
Score = 197 bits (218), Expect = 2e-44
Identities = 182/229 (79%), Gaps = 6/229 (3%)
Strand=Plus/Minus
Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973
||||||||||| ||||||||||||||| || || |||| || |||| |||||
Sbjct 492 TACAAGGTGCTGAAGCAGGTGCACCCCGACAC-----GGGCATC-TCGTCCAAGGCCATG 439
Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033
|||||||||||||| || |||||||| |||| ||||||| | ||||||| |||
Sbjct 438 GGCATCATGAACTCGTTCGTGAACGACATCTTCGAGCGCATCGCCGGCGAGGCCTCGCGC 379
Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093
||||||| || |||||||||| || ||| | |||| ||||||||||| ||||||||
Sbjct 378 CTGGCGCACTACAACAAGCGCTCGACCATCACCTCGCGGGAGATCCAGACGGCCGTGCGG 319
Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142
||| | ||| |||||| ||||||| |||||||||||||||||||||||
Sbjct 318 CTGCTGCTGCCCGGCGAGCTGGCCAAGCACGCCGTCTCCGAGGGCACCA 270
>seq4553
Length=6585
Score = 159 bits (176), Expect = 5e-33
Identities = 175/229 (76%), Gaps = 8/229 (3%)
Strand=Plus/Plus
Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973
||||||||||| ||||||||||||||| || || |||| || |||| |||||
Sbjct 5672 TACAAGGTGCTGAAGCAGGTGCACCCCGACAC-----GGGCATC-TCGTCCAAGGCCATG 5725
Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033
|||||||||||||| || |||||||| |||| ||||||| | ||||||| |||
Sbjct 5726 GGCATCATGAACTCGTTCGTGAACGACATCTTCGAGCGCATCGCCGGCGAGGCCTCGCGC 5785
Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093
||||||| || |||||||||| || ||| | |||| || |||| ||| |||| | |
Sbjct 5786 CTGGCGCACTACAACAAGCGCTCGACCATCACCTCGCGGGACATCCTGACGGCCG-GGGA 5844
Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142
| | ||| |||| | ||||||| |||||||||||||||||||||||
Sbjct 5845 AAAAAC-TGCCCGGCTAGCTGGCCAAGCACGCCGTCTCCGAGGGCACCA 5892
>seq36225
Length=28417
Score = 122 bits (134), Expect = 1e-21
Identities = 125/161 (78%), Gaps = 2/161 (1%)
Strand=Plus/Plus
Query 262068 CGCGGACCGTCGTGCCCGCACGACAGATCTGGTCGGCCATTGTCGCGGCCCATATCGAGA 262127
||||| ||| ||| || | ||| |||||| ||||| ||| | | || | |||||
Sbjct 9789 CGCGGCGCGTGGTGAGGGCGCAGCAGCTCTGGTACGCCATCATCGAGTCGCAGACCGAGA 9848
Query 262128 CCGGCACGCCCTACATGGTCTACAAGGACGCCGTCAACCTGACCAGCAACCAGCAGAACC 262187
||||||| ||||||||| ||||||||||| || ||||| | ||||||||||||||||
Sbjct 9849 CCGGCACCCCCTACATGCTCTACAAGGACTCCTGCAACCGCAAGAGCAACCAGCAGAACC 9908
Query 262188 TGGGCACCACGACAGAG-GCCAACCTGTGCACCGAGATCGT 262227
||||||||| | || | |||||| ||||||||||||||
Sbjct 9909 TGGGCACCATCA-AGTGCAGCAACCTCTGCACCGAGATCGT 9948
Score = 95.1 bits (104), Expect = 2e-13
Identities = 78/95 (82%), Gaps = 0/95 (0%)
Strand=Plus/Plus
Query 259970 TGCTTTCTGTTGGACATGAAGGCCGATTCGATCGAGGGCATCTATGACACGCTCAAGCAG 260029
||||| ||| || |||||||| ||| |||||||||||||| ||||| || ||||||
Sbjct 6408 TGCTTCCTGCTGTGCATGAAGGACGACAGCATCGAGGGCATCTACGACACCCTGAAGCAG 6467
Query 260030 TGCGCGCTCATCTCCAAGGCGGCCGGCGGCATCGG 260064
|||||||| ||||||||| | || || ||||||||
Sbjct 6468 TGCGCGCTGATCTCCAAGTCTGCGGGTGGCATCGG 6502
>seq43608
Length=19049
Score = 100 bits (110), Expect = 4e-15
Identities = 92/115 (80%), Gaps = 1/115 (1%)
Strand=Plus/Plus
Query 1455715 CGAGCCGCTGCTGCGCGATAACCCGAACCGCTTTGTCCTGTTCCCCATCCGCTACCAGCG 1455774
||||||||||||||| || ||||| |||||| ||| | |||||||||| |||||
Sbjct 4 CGAGCCGCTGCTGCGGGACAACCCCCGCCGCTTCGTCATCTTCCCCATCCAGTACCACGA 63
Query 1455775 GATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGT 1455829
|| ||| | ||||| ||| ||||||||||| ||||| ||||| || ||||||||
Sbjct 64 TATCTGGCAGATGTA-CAAGAAGGCCGAGGCTTCCTTCTGGACGGCGGAGGAGGT 117
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7172651123118838
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |