Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Merops_20nubicus_20[refseq_20GCF_5F000691845.1_202014-05-16] 53,499 sequences; 1,062,961,556 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq51860 116 3e-21 >seq51860 Length=4005 Score = 116 bits (128), Expect = 3e-21 Identities = 141/192 (73%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| |||| || ||| || | || ||||||||||| || ||||| Sbjct 3460 CTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGTCCATCTTCCAGCTGCTTGCCAGCAAA 3519 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 |||| || |||||| || | || | | ||||||||| |||||| ||||| | | Sbjct 3520 GATCAGCCTCTGCTGATCGGGGGGGATACCTTCCTTGTCCTGGATCTTGGCCTTCACATT 3579 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | ||||| || | || || |||| ||||| || || || |||| |||||||| Sbjct 3580 CTCGATGGTGTCACTGGGCTCAACTTCCAGGGTGATTGTCTTGCCAGTCAGGGTTTTCAC 3639 Query 35725 AAATATCTGCAT 35736 ||| |||||||| Sbjct 3640 AAAGATCTGCAT 3651 Score = 113 bits (124), Expect = 4e-20 Identities = 140/192 (73%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| |||| || ||| || | || ||||||||||| || ||||| Sbjct 3232 CTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGTCCATCTTCCAGCTGCTTGCCAGCAAA 3291 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 |||| || |||||| || | || | | ||||||||| |||||| ||||| | | Sbjct 3292 GATCAGCCTCTGCTGATCGGGGGGGATACCTTCCTTGTCCTGGATCTTAGCCTTCACATT 3351 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | ||||| || | || || |||| ||||| || || || |||| || ||||| Sbjct 3352 CTCAATGGTGTCACTGGGCTCAACTTCCAGGGTGATTGTCTTGCCAGTCAGGGTCTTCAC 3411 Query 35725 AAATATCTGCAT 35736 ||| |||||||| Sbjct 3412 AAAGATCTGCAT 3423 Score = 104 bits (114), Expect = 2e-17 Identities = 138/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605 ||||| || |||||||| |||| || ||| || | || ||||||||||| || ||||| Sbjct 3689 TCCTTCTGGATGTTGTAGTCGGACAGGGTGCGTCCATCTTCCAGCTGCTTGCCAGCAAAG 3748 Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665 |||| || |||||| || | || | | ||||||||| |||||| ||||| | | Sbjct 3749 ATCAGCCTCTGCTGATCGGGGGGGATACCTTCCTTGTCCTGGATCTTGGCCTTCACATTC 3808 Query 35666 GCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACA 35725 | | ||||| || | || || |||| || || || ||||| || | || ||||| Sbjct 3809 TCGATGGTGTCACTGGGCTCAACTTCCAGGGTAATGGTCTTACCAGTTAGGGTCTTCACG 3868 Query 35726 AATATCTGCATT 35737 || ||||||||| Sbjct 3869 AAGATCTGCATT 3880 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450492137414920