Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Merops_20nubicus_20[refseq_20GCF_5F000691845.1_202014-05-16] 53,499 sequences; 1,062,961,556 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq43608 109 4e-19 seq49535 87.8 1e-12 seq26544 82.4 6e-11 >seq43608 Length=19049 Score = 109 bits (120), Expect = 4e-19 Identities = 89/108 (82%), Gaps = 0/108 (0%) Strand=Plus/Plus Query 43913 CAAGAAGTTCAATTACCAGAAGCACGATGTTTTTATGGGTTTCAAATTGCCATAGAAAAT 43972 |||||||| ||| | ||||||| || ||||| ||||| || || |||||||| ||||| Sbjct 835 CAAGAAGTACAAGTCACAGAAGCTCGTTGTTTCTATGGTTTCCAGATTGCCATGGAAAAC 894 Query 43973 ATTCATTCGGAAATGTACAGTCTTCTGATAGATACGTACATCAAAGAT 44020 || ||||| ||||||||||||||||| || || || ||||| |||||| Sbjct 895 ATACATTCAGAAATGTACAGTCTTCTTATTGACACCTACATTAAAGAT 942 >seq49535 Length=70244 Score = 87.8 bits (96), Expect = 1e-12 Identities = 90/118 (76%), Gaps = 0/118 (0%) Strand=Plus/Minus Query 105644 GATGCATGTGTCAAATGTAATGTTAAATGTCTTGTGTACACAAGCAGCATGGAAGTTATA 105703 || ||||||| | | |||||||| | | | || | ||||| |||||||| ||||| | | Sbjct 22123 GAGGCATGTGCCCACTGTAATGTCCAGTATTTTATATACACCAGCAGCATAGAAGTGACA 22064 Query 105704 GGGCCAAATAATAAAGGAGATCCATTTATCATGGGCGATGAAGATACATCATATGAAA 105761 || ||||| | ||||| || ||| || ||| || |||||||||||| | ||||||| Sbjct 22063 GGCCCAAACTACAAAGGTGACCCAGTTTTCAACGGTGATGAAGATACAGCTTATGAAA 22006 >seq26544 Length=14703 Score = 82.4 bits (90), Expect = 6e-11 Identities = 74/93 (80%), Gaps = 0/93 (0%) Strand=Plus/Minus Query 43928 CCAGAAGCACGATGTTTTTATGGGTTTCAAATTGCCATAGAAAATATTCATTCGGAAATG 43987 ||||||||||| ||||| ||||| ||||| ||| ||| || || |||| || || ||| Sbjct 11923 CCAGAAGCACGTTGTTTCTATGGCTTTCAGATTCTCATCGAGAACGTTCACTCAGAGATG 11864 Query 43988 TACAGTCTTCTGATAGATACGTACATCAAAGAT 44020 ||||| | || ||||| || |||||||||||| Sbjct 11863 TACAGCTTGCTCATAGACACCTACATCAAAGAT 11831 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397196851111495