Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Merops_20nubicus_20[refseq_20GCF_5F000691845.1_202014-05-16] 53,499 sequences; 1,062,961,556 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq48507 179 1e-39 seq51860 149 2e-30 seq30680 105 2e-17 seq46514 96.9 1e-14 seq43608 87.8 5e-12 >seq48507 Length=51456 Score = 179 bits (198), Expect = 1e-39 Identities = 905/1426 (63%), Gaps = 37/1426 (3%) Strand=Plus/Minus Query 349259 GTAGAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTACC 349318 || || || || || ||||| || || ||| | || ||||| ||||| || || ||| Sbjct 51304 GTGGAGATCATCGCCAATGACCAGGGCAACCGCACCACGCCCAGCTACGTCGCGTTCACC 51245 Query 349319 GAAACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAAAT 349378 || || ||||| | || |||||| |||| || || || | ||| || || | || Sbjct 51244 GATACCGAGCGCCTCATCGGTGATGCTGCCAAGAACCAGGTGGCTATGAACCCTACCAAC 51185 Query 349379 ACGGTTTTTGATGCTAAGCGACTTATTGGTAG-AAGTTTTTCTGACAAATCTACA---CA 349434 || | || ||||||||||| || || || | |||| | ||| | | || || Sbjct 51184 ACCATCTTCGATGCTAAGCGTCTCATCGGCCGCAAGTAT----GACGACCCCACGGTGCA 51129 Query 349435 ATCTGATCTAAAACATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGATAAACCAATTAT 349494 |||||| | || || | || || ||| || || || |||| || || | | Sbjct 51128 ATCTGACATGAAGCACTGGCCCTTCCGTGTGGTG---AATGAGGGTGGCAAGCCCAAGGT 51072 Query 349495 TGAGGTTGAATATAAAGGTGAACAAAAACAATTTTTACCC-GAAGAAATTTCATCAATGG 349553 | || || || || ||||| | || | ||| | ||| || || || || |||| Sbjct 51071 ACAAGTGGAGTACAAGGGTGAG-ATGAAGACTTTCTTCCCAGAGGAGATCAGCTCCATGG 51013 Query 349554 TTTTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCTG 349613 | | || |||||||| || ||||| || ||| | || | || |||||| Sbjct 51012 TCCTCACCAAGATGAAGGAGATCGCTGAGGCCTATCTGGGGCGCAAGGTGCAGAATGCTG 50953 Query 349614 TTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCA 349673 | || || || || || || || ||||| ||||||| || || |||||||| |||| Sbjct 50952 TCATCACAGTGCCTGCTTACTTCAATGACTCCCAGCGCCAGGCCACCAAAGATGCCGGCA 50893 Query 349674 GCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCAT 349733 ||| | || | ||||| | | || || || || ||||| || || || || || | Sbjct 50892 CCATCACTGGCCTTAATGTGATGCGTATTATCAACGAGCCCACGGCAGCTGCTATCGCCT 50833 Query 349734 ATGGGCTTGATAAAATGAGTGACCA------AGaaaaaaaTATTCTTATTTTTGATTTAG 349787 |||| | || || | || | ||| || ||| | || || ||||| || | Sbjct 50832 ATGGCTTGGACAAGAAAGGTACTCGGGCTGGAGAGAAGAATGTGCTCATCTTTGACTTGG 50773 Query 349788 GTGGTGGTACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAG 349847 | || || ||||||||||| || | || || |||| || || || || || || || Sbjct 50772 GAGGGGGCACTTTTGATGTGTCCATCCTTACCATTGAGGATGGCATCTTCGAGGTGAAGT 50713 Query 349848 CAACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCATT 349907 | || ||||| || || || || ||||| || || ||||| || || | || |||| Sbjct 50712 CCACAGCTGGGGACACCCACCTGGGTGGGGAGGACTTTGACAACCGCATGGTGAACCATT 50653 Query 349908 TTGTTAAAGAATTTAAGCGTCAAGC-TAAAATTGATAT---TGGAGATAATCCTAGAGCA 349963 |||| ||||||| ||||| ||||| || ||| || ||| | || | |||| Sbjct 50652 TTGTGGAAGAATTCAAGCG-CAAGCACAAGCGTGACATCGCTGGCAACAAGC---GAGCG 50597 Query 349964 ATGCGTCGCCTAAGAACTGCGTGTGAACGTGCTAAGCGTTCCTTATCATCTACTACCCAA 350023 || | || || | || || ||||| | || ||||| || | ||| | || ||| Sbjct 50596 GTGAGGCGACTGCGTACGGCTTGTGAGAGGGCGAAGCGCACCCTCAGCTCTTCCACACAA 50537 Query 350024 ACCTCTATTGAAATTGATTCTCTTGCTGATGGCAAAGATTTCTTTTCATCTATTACACGT 350083 | ||||| ||||| || || ||| |||| || |||| | || ||||| ||| Sbjct 50536 GCTAGCATTGAGATTGACTCCCTCTATGAGGGCATTGACTTCTACACCTCCATTACTCGT 50477 Query 350084 GCTCGGTTTGAAGAATTATGTATGGATCTTTTTAGAGCAACAATGGATCCTGTGGAAAAA 350143 || || || || || | | ||||| || | | || |||| || ||||| || Sbjct 50476 GCCCGCTTCGAGGAGCTCAATGCTGATCTCTTCCGTGGCACCCTGGAGCCAGTGGAGAAG 50417 Query 350144 GTATTAAAAGATGCAAAAATGTCCAAAAATCAGATTGATGAAGTAGTTTTAGTTGGTGGT 350203 | | ||||| || | ||| ||||| | || | || | || ||||| Sbjct 50416 GCTCTGCGTGATGCCAAGCTAGACAAGGGCCAGATACAGGAGATTGTACTGGTGGGTGGC 50357 Query 350204 TCTACACGTATTCCAAAAGTTCAACAGTTACTATCTGAGTTTTTTAATGGCAAAGAAC-C 350262 ||||| ||||| || || | ||| || | || || || || ||||||||||| | | Sbjct 50356 TCTACCCGTATCCCCAAGATCCAAAAGCTGCTGCAGGACTTCTTCAATGGCAAAGAGCTC 50297 Query 350263 TTCTAGATCAATTAATCCAGATGAAGCTGTTGCATATGGTGCTGCTGTTCAGGCATCTAT 350322 | ||| | || || || ||||| |||||||| ||||||||||| || || ||| |||| Sbjct 50296 AACAAGAGC-ATCAACCCCGATGAGGCTGTTGCTTATGGTGCTGCCGTGCAAGCAGCTAT 50238 Query 350323 TTTATCTGGAAATAAGAGTTCTAAAATTG---ATGATCTATTACTACTAGATGTAACTCC 350379 | ||| | ||| ||| | | || | || || | || | ||||| || || Sbjct 50237 CCTCATGGGAGACAAG---TCTGAGAATGTGCAAGACCTGCTGCTGTTGGATGTCACCCC 50181 Query 350380 ACTTTCGCTTGGATTAGAAACTTCTGGTGAAGTAATGACTGTTCTTATTCCTAGAAATAG 350439 || || || || | || || |||||| ||| ||||| | ||| || | || | Sbjct 50180 TCTGTCCCTGGGCATCGAGACAGCTGGTGGAGTGATGACCGCTCTCATCAAGCGCAACAC 50121 Query 350440 TACTGTACCTACAAAAAAGTCCCAAACTTTTTCTACATTTGCAGATAATCAG-CCAGCGG 350498 || | || || ||| | | || || || | || | |||| || ||| |||| | Sbjct 50120 CACCATTCCCACCAAACAAACTCAGACCTTCACCACCTACTCAGACAACCAGAGCAGC-G 50062 Query 350499 TAACAATTCAAGTATTTGAAGGTGAACGTGCTCGCACTAAAGATAATAATAAACTTGGAG 350558 | | || || | || ||||| | ||| || || || || || || || Sbjct 50061 TCCTGGTCCAGGTGTACGAGGGTGAGAGGGCTATGACGAAGGACAACAACTTGCTGGGCA 50002 Query 350559 AATTTACCCTAAGTGAAATTCCACCAATGCCTAGAGGAGTTCCTCAGATTGAAGTCTCTT 350618 ||||| ||||| | || || ||| || | ||||| || ||||| || ||| ||| Sbjct 50001 AATTTGACCTAACGGGCATCCCCCCAGCACCCCGTGGAGTCCCCCAGATCGAGGTCACTT 49942 Query 350619 TCGATATTGATTCAAATGGTATTTTAAATGTTACCGCAGTTGAAAA 350664 | || || ||| | || ||||| | ||||| | ||| || || || Sbjct 49941 TTGACATCGATGCCAACGGTATCCTGAATGTCAGCGCCGTGGACAA 49896 >seq51860 Length=4005 Score = 149 bits (164), Expect = 2e-30 Identities = 160/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 140526 AGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCT 140585 || |||||||| ||||| ||||| || || || || || || || | || || |||||| Sbjct 3212 AGCACAAGATGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGTCCATCT 3271 Query 140586 TCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCC 140645 || || || || ||||||||||| || | |||||||| || || || ||||| || ||| Sbjct 3272 TCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCGGGGGGGATACCTTCCTTGTCC 3331 Query 140646 TGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTC 140705 || || ||||| || ||||| ||||| | ||| || |||||||| || || | |||| Sbjct 3332 TGGATCTTAGCCTTCACATTCTCAATGGTGTCACTGGGCTCAACTTCCAGGGTGATTGTC 3391 Query 140706 TTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || || || || || || ||||| |||||||| Sbjct 3392 TTGCCAGTCAGGGTCTTCACAAAGATCTGCAT 3423 Score = 143 bits (158), Expect = 8e-29 Identities = 159/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 140526 AGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCT 140585 || |||||||| ||||| ||||| || || || || || || || | || || |||||| Sbjct 3440 AGCACAAGATGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGTCCATCT 3499 Query 140586 TCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCC 140645 || || || || ||||||||||| || | |||||||| || || || ||||| || ||| Sbjct 3500 TCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCGGGGGGGATACCTTCCTTGTCC 3559 Query 140646 TGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTC 140705 || || || || || ||||| || || | ||| || |||||||| || || | |||| Sbjct 3560 TGGATCTTGGCCTTCACATTCTCGATGGTGTCACTGGGCTCAACTTCCAGGGTGATTGTC 3619 Query 140706 TTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || || || || ||||| ||||| |||||||| Sbjct 3620 TTGCCAGTCAGGGTTTTCACAAAGATCTGCAT 3651 Score = 122 bits (134), Expect = 3e-22 Identities = 153/209 (73%), Gaps = 1/209 (0%) Strand=Plus/Plus Query 140530 CAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCTTCAA 140589 |||| || || || || || || || || || || || || | || || |||||||| | Sbjct 3673 CAAG-TGCAGGGTGGATTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGTCCATCTTCCA 3731 Query 140590 GTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAA 140649 | || || ||||||||||| || | |||||||| || || || ||||| || ||||| | Sbjct 3732 GCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCGGGGGGGATACCTTCCTTGTCCTGGA 3791 Query 140650 TTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTC 140709 | || || || ||||| || || | ||| || |||||||| || |||| ||||| | Sbjct 3792 TCTTGGCCTTCACATTCTCGATGGTGTCACTGGGCTCAACTTCCAGGGTAATGGTCTTAC 3851 Query 140710 CGGTTAGTGTTTTTACAAAAATCTGCATT 140738 | ||||| || || || || ||||||||| Sbjct 3852 CAGTTAGGGTCTTCACGAAGATCTGCATT 3880 >seq30680 Length=3589 Score = 105 bits (116), Expect = 2e-17 Identities = 108/141 (77%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 349608 ATGCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATG 349667 |||||||| | |||||||||||||| || || ||| | |||||| || |||||||||| Sbjct 2288 ATGCTGTTGTGACTGTACCAGCCTACTTCAACGATTCTCAGCGTCAGGCTACAAAAGATG 2229 Query 349668 CTGGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAA 349727 |||| | ||||| ||| | ||||| || |||| || || || || || ||||| || | Sbjct 2228 CTGGAACTATTGCAGGGCTCAATGTCCTGCGAATCATCAACGAGCCAACAGCTGCTGCCA 2169 Query 349728 TTGCATATGGGCTTGATAAAA 349748 | || ||||| || || |||| Sbjct 2168 TAGCCTATGGTCTGGACAAAA 2148 Score = 96.9 bits (106), Expect = 1e-14 Identities = 349/539 (65%), Gaps = 8/539 (1%) Strand=Plus/Minus Query 349770 TTCTTATTTTTGATTTAGGTGGTGGTACTTTTGATGTATCACTACTAACACTTGAAGAGG 349829 ||||||| ||||| | || ||||| || || || || || | || || ||||||| | Sbjct 2026 TTCTTATCTTTGACCTGGGAGGTGGCACCTTCGACGTGTCGATCCTGACGATTGAAGATG 1967 Query 349830 GAATTTTTGAAGTTAAAGCAACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGATA 349889 | || ||||| || ||| | ||||| ||||| || || || ||||||||||| ||||||| Sbjct 1966 GCATCTTTGAGGTGAAATCCACTGCAGGTGACACTCACCTGGGTGGAGAAGACTTTGATA 1907 Query 349890 ATCGTCTCGTTTCGCATTTTGTTAAAGAATTTAAGCGTCAAGC-TAAAATTGATATTGGA 349948 | || | || || || | || || ||||| ||||| || | || || | Sbjct 1906 ACCGCATGGTGAACCACTTCATCGCCGAGTTCAAGCG-CAAGCACAAGAAGGACATCAGT 1848 Query 349949 GATAATCCTAGAGCAATGCGTCGCCTAAGAACTGCGTGTGAACGTGCTAAGCGTTCCTTA 350008 || || || || |||| || || | || || || || ||||| ||||| || | Sbjct 1847 GAGAACAAGAGGGCCGTGCGGCGTCTGCGCACCGCCTGCGAGCGTGCCAAGCGCACCCTG 1788 Query 350009 TCATCTACTACCCAAACCTCTATTGAAATTGATTCTCTTGCTGATGGCAAAGATTTCTTT 350068 || || | ||||| || || || || || ||||| || |||| || |||| Sbjct 1787 TCCTCCAGCACCCAGGCCAGCATCGAGATCGACTCTCTGTACGAGGGCATCGACTTCTAC 1728 Query 350069 TCATCTATTACACGTGCTCGGTTTGAAGAATT--ATGTATGGATCTTTTTAGAGCAACAA 350126 | || || || | ||||| || || || | | | | || || || | | || Sbjct 1727 ACGTCCATCACCAGAGCTCGCTTCGAGGAGCTGAACGCA--GACCTGTTCCGCGGCACCC 1670 Query 350127 TGGATCCTGTGGAAAAAGTATTAAAAGATGCAAAAATGTCCAAAAATCAGATTGATGAAG 350186 |||| |||||||| || | | | ||||| || || ||| ||||| | || Sbjct 1669 TGGACCCTGTGGAGAAGGCCCTGAGGGATGCCAAGCTGGACAAGTCGCAGATCCACGACA 1610 Query 350187 TAGTTTTAGTTGGTGGTTCTACACGTATTCCAAAAGTTCAACAGTTACTATCTGAGTTTT 350246 | || | || || || ||||| || || ||||| |||| | | || || || | Sbjct 1609 TTGTGCTTGTGGGCGGCTCTACTCGGATCCCAAAGATTCAGAAACTGCTGCAGGATTTCT 1550 Query 350247 TTAATGGCAAAGAAC-CTTCTAGATCAATTAATCCAGATGAAGCTGTTGCATATGGTGC 350304 | || |||||||| | | ||| | || ||||| ||||| ||||| || || ||||| Sbjct 1549 TCAACGGCAAAGAGCTGAACAAGAGC-ATCAATCCTGATGAGGCTGTGGCTTACGGTGC 1492 Score = 84.2 bits (92), Expect = 7e-11 Identities = 114/156 (73%), Gaps = 5/156 (3%) Strand=Plus/Minus Query 349433 CAATCTGATCTAAAACATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGATAAACCAATT 349492 || |||||| | || || | ||||| ||||| || || || | || | ||||| Sbjct 2546 CAGTCTGATATGAAGCACTGGCCTTTCACTGTGGTG---AATGATGCTGGCAGACCAAAA 2490 Query 349493 ATTGAGGTTGAATATAAAGGTGAACAAAAACAATTTTTACCC-GAAGAAATTTCATCAAT 349551 | |||| || || ||||| || | ||| | || ||||| ||||||||||| || || Sbjct 2489 GTCCAGGTGGAGTACAAAGGCGAG-ACAAAGAGCTTCTACCCAGAAGAAATTTCTTCCAT 2431 Query 349552 GGTTTTAGTTAAAATGAAGGAAATTGCTGAAGCATA 349587 ||||||| |||||||||||||||||| ||||| || Sbjct 2430 GGTTTTAACTAAAATGAAGGAAATTGCAGAAGCTTA 2395 >seq46514 Length=4779 Score = 96.9 bits (106), Expect = 1e-14 Identities = 128/177 (72%), Gaps = 3/177 (2%) Strand=Plus/Minus Query 349718 GCTGCAGCAATTGCATATGGGCTTGATAAAATGAGTGACCAAGaaaaaaaTATTCTTATT 349777 ||||| || ||||| || || || || || ||| || || || || || || | Sbjct 3472 GCTGCTGCCATTGCCTACGGACTGGACAA---GAGAGAGGGGGAGAAGAACATCCTCGTG 3416 Query 349778 TTTGATTTAGGTGGTGGTACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTT 349837 ||||| || ||||| || ||||| ||||| || || || ||| |||| | ||| | ||| Sbjct 3415 TTTGACTTGGGTGGAGGAACTTTCGATGTCTCCCTCCTCACAATTGACAACGGAGTCTTT 3356 Query 349838 GAAGTTAAAGCAACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGATAATCGT 349894 |||||| || ||| |||||| || || || |||||||||||||||||| | ||| Sbjct 3355 GAAGTTGTGGCTACTAATGGTGACACTCACCTGGGTGGAGAAGATTTTGATCAACGT 3299 Score = 96.9 bits (106), Expect = 1e-14 Identities = 128/177 (72%), Gaps = 3/177 (2%) Strand=Plus/Minus Query 349718 GCTGCAGCAATTGCATATGGGCTTGATAAAATGAGTGACCAAGaaaaaaaTATTCTTATT 349777 ||||| || ||||| || || || || || ||| || || || || || || | Sbjct 3672 GCTGCTGCCATTGCCTACGGACTGGACAA---GAGAGAGGGGGAGAAGAACATCCTCGTG 3616 Query 349778 TTTGATTTAGGTGGTGGTACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTT 349837 ||||| || ||||| || ||||| ||||| || || || ||| |||| | ||| | ||| Sbjct 3615 TTTGACTTGGGTGGAGGAACTTTCGATGTCTCCCTCCTCACAATTGACAACGGAGTCTTT 3556 Query 349838 GAAGTTAAAGCAACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGATAATCGT 349894 |||||| || ||| |||||| || || || |||||||||||||||||| | ||| Sbjct 3555 GAAGTTGTGGCTACTAATGGTGACACTCACCTGGGTGGAGAAGATTTTGATCAACGT 3499 >seq43608 Length=19049 Score = 87.8 bits (96), Expect = 5e-12 Identities = 99/131 (76%), Gaps = 4/131 (3%) Strand=Plus/Minus Query 223719 ATGCCTCATCTCT--TGATATTAATTCATTTGAAAATGTTAATCCAGGCATTAAACCTCT 223776 || |||||||||| ||||| | |||||| ||||| || | |||||||||||| ||||| Sbjct 3260 ATACCTCATCTCTGCTGATA--AGTTCATTAGAAAAAGTGAGTCCAGGCATTAATCCTCT 3203 Query 223777 CTTTTTCATCCAAAATATTGCGCAAAAAGCTCCTGaaaaaaaTATACCTTCTACACAAGC 223836 || |||| |||||| || | ||||| || ||||| || || ||||| || || Sbjct 3202 TTTCTTCAGCCAAAAAATAGATGCAAAAGAGCCAGAAAAGAAGATTCCTTCCACTGCTGC 3143 Query 223837 AAACGCTACTA 223847 ||| ||||||| Sbjct 3142 AAAAGCTACTA 3132 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1514215759874697