Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Merops_20nubicus_20[refseq_20GCF_5F000691845.1_202014-05-16] 53,499 sequences; 1,062,961,556 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq36225 91.5 2e-13 >seq36225 Length=28417 Score = 91.5 bits (100), Expect = 2e-13 Identities = 79/98 (81%), Gaps = 0/98 (0%) Strand=Plus/Minus Query 79654 CCGATGCCCCCGGACCACTTGGAGATGTGCGCGCACTCCTTGAGCGTCTCGTAGATGCCC 79713 |||||||| || | |||||||||| ||||||||| ||| || || |||||||||||| Sbjct 6502 CCGATGCCACCCGCAGACTTGGAGATCAGCGCGCACTGCTTCAGGGTGTCGTAGATGCCC 6443 Query 79714 TCGATCGAGTCGTCCTTCATAGCGACCAGGAAGCAGCT 79751 ||||| |||||||||||| | |||||||||||| Sbjct 6442 TCGATGCTGTCGTCCTTCATGCACAGCAGGAAGCAGCT 6405 Score = 87.8 bits (96), Expect = 2e-12 Identities = 78/98 (80%), Gaps = 0/98 (0%) Strand=Plus/Plus Query 19253 AGCTGTTTCCTAGTGGCTATGAAGGATGACAGCATTGAGGGCATCTACGAGACGCTCAAG 19312 ||||| ||||| || |||||||| |||||||| |||||||||||||| || || ||| Sbjct 6405 AGCTGCTTCCTGCTGTGCATGAAGGACGACAGCATCGAGGGCATCTACGACACCCTGAAG 6464 Query 19313 GAGTGCGCGCACATCTCCAAGTGGTCCGGGGGTATCGG 19350 ||||||||| |||||||||| | || || ||||| Sbjct 6465 CAGTGCGCGCTGATCTCCAAGTCTGCGGGTGGCATCGG 6502 Score = 84.2 bits (92), Expect = 2e-11 Identities = 66/79 (84%), Gaps = 0/79 (0%) Strand=Plus/Minus Query 79127 ACTTGATGGTGCCGATGTTCTTCTGGTTGCTCTTCTCGTTACAGGCGTCCTTGTAGCACA 79186 ||||||||||||| | ||||| |||||||||||| ||| |||| |||||||||| || Sbjct 9923 ACTTGATGGTGCCCAGGTTCTGCTGGTTGCTCTTGCGGTTGCAGGAGTCCTTGTAGAGCA 9864 Query 79187 TGTACGGCGTCCCGGTCTC 79205 |||| || || |||||||| Sbjct 9863 TGTAGGGGGTGCCGGTCTC 9845 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548157980896560