Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Merops_20nubicus_20[refseq_20GCF_5F000691845.1_202014-05-16] 53,499 sequences; 1,062,961,556 total letters Query= NC_028379.1 Length=205896 Score E Sequences producing significant alignments: (Bits) Value seq51377 221 2e-52 seq29621 127 3e-24 >seq51377 Length=985 Score = 221 bits (244), Expect = 2e-52 Identities = 308/428 (72%), Gaps = 4/428 (1%) Strand=Plus/Minus Query 13601 GCCGGGAGACTACGTGAACATGACGGCCGACTGCGTGGCCTTCGTGAAAGACAGGGGGTA 13660 ||| || |||||| ||||||||||| ||||||| |||||| ||| | || ||| Sbjct 859 GCCCGGCGACTACCTGAACATGACGAGGGACTGCGGCGCCTTCAAGAAGAGCCGGCGGTT 800 Query 13661 TCTCGTGAGGCCCCTGAGCCTGGAAGAGGTCGAGTTTCCCATCGCCTACTCGATCGTGAT 13720 | | | || ||||||| ||| |||| ||||| ||| |||||||||| || || || Sbjct 799 CATTGAGTTCCCGCTGAGCCAGGAGGAGGAGGAGTTCCCCCTCGCCTACTCCATGGTCAT 740 Query 13721 CCACCACAAGATCGAGATGTTCGAGCGCCTCCTGAGGGCCATCTACGCCCCGCAGAACCT 13780 |||| |||| ||||||||||| ||||| |||||||||||| |||| ||||| |||||| | Sbjct 739 CCACGACAAAATCGAGATGTTTGAGCGGCTCCTGAGGGCCCTCTATGCCCCCCAGAACAT 680 Query 13781 CTACTGCGTCCACGTGGACTCCAAGTCCGGCGACGAGTTCATCCGG-GGCGTCTC-GGCC 13838 ||||||||||||| | ||| ||||||| | | ||| | || ||| | | |||| Sbjct 679 CTACTGCGTCCACATTGACAGCAAGTCCCCAGCCACCTTC--CAGGAGGCTGCACGGGCC 622 Query 13839 ATCGCCAGGTGCTTCCCTAACGTGGCCCTGGCCCACCGGCTGCACGACGTGGTGTACGGC 13898 |||| |||||||| || || ||||| ||| ||| | | ||||| |||| | Sbjct 621 ATCGTGGCCTGCTTCCCCAATGTCTTTGTGGCCAGCCGCCTGGAAAAGGTGGTCTACGCC 562 Query 13899 TCCTGGAGTCGCGTGCAGGCCGACCTCAGCTGCATGTCGGACCTGGACGCCTCCCCCGTC 13958 || ||| || ||||||||||||| | ||||||| ||||||| ||| || Sbjct 561 TCTTGGTCCCGGCTGCAGGCCGACCTAAACTGCATGCAGGACCTGTTGCAGAGCCCTGTG 502 Query 13959 AAGTGGAGGTACCTGCTCAACCTGTGCGGGATGGACTTCCCGCTCAAGACCAACCTGGAG 14018 |||| | ||||| || ||| ||||| | || ||||| ||||||||||| ||| Sbjct 501 CCGTGGCGCTACCTCCTTAACACCTGCGGCACCGATTTCCCCATCAAGACCAACGCCGAG 442 Query 14019 ATCGTGCG 14026 ||||| || Sbjct 441 ATCGTCCG 434 >seq29621 Length=16225 Score = 127 bits (140), Expect = 3e-24 Identities = 254/369 (69%), Gaps = 18/369 (5%) Strand=Plus/Minus Query 13695 TTTCCCATCGCCTACTCGATCGTGATCCACCACAAGA---TCGAGATGTTCGAGCGCCTC 13751 || |||||||||||| || ||| || |||||| |||||| |||||| | ||| Sbjct 11438 TTCCCCATCGCCTACG---TCATGACCCTGCACAAGGAGTTCGAGACCTTCGAGAGGCTC 11382 Query 13752 CTGAGGGCCATCTACGCCCCGCAGAACCTCTACTGCGTCCACGTGGACTCCAAGTCCGGC 13811 | ||||| | ||| || |||||| |||||||||||||||||||| | ||| | Sbjct 11381 TTCAGGGCAGTGTACATGCCCCAGAACATCTACTGCGTCCACGTGGACGCGAAGGCGCCA 11322 Query 13812 GACGAGTTC-ATCCGGGGCGTCTCGGCCATCGCCAGGTGCTTCCCTAACGTGGCCCTGGC 13870 | | ||| ||| || | || || | | ||||||||||| |||| |||| | Sbjct 11321 GCCCTCTTCCATCAGGAG-GTGAAGGACCTGCTGAGGTGCTTCCCCAACGCCTTCCTGTC 11263 Query 13871 CCACCGG-CTGCACGACGTGGTGTACGGCTCCTGGAGTC----GCGTGCAGGCCGACCTC 13925 | | || | | || ||||| |||||| || ||| || | | |||||||||| Sbjct 11262 CTCCGGGGCCGAGCGG-GTGGTCTACGGC----GGCGTCTCCCGCCTACGGGCCGACCTC 11208 Query 13926 AGCTGCATGTCGGACCTGGACGCCTCCCCCGTCAAGTGGAGGTACCTGCTCAACCTGTGC 13985 |||||||| ||||| |||||| | || ||| | |||||||||||| ||| Sbjct 11207 CGCTGCATGAGAGACCTTCTGGCCTCCACTGTGCCCTGGCGTTACCTGCTCAACACCTGC 11148 Query 13986 GGGATGGACTTCCCGCTCAAGACCAACCTGGAGATCGTGCGGGCGCTGAAGGCCCTGGGC 14045 || ||||||||| | || ||||||| ||||||||| | | ||||||| ||| || Sbjct 11147 GGCCAGGACTTCCCCTTGAAAACCAACCGGGAGATCGTCCAGCTCCTGAAGGGCCTCGGG 11088 Query 14046 GGCAAGAAC 14054 || |||||| Sbjct 11087 GGGAAGAAC 11079 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658298676394240