Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Merops_20nubicus_20[refseq_20GCF_5F000691845.1_202014-05-16]
53,499 sequences; 1,062,961,556 total letters
Query= NC_028461.1
Length=127011
Score E
Sequences producing significant alignments: (Bits) Value
seq37467 167 2e-36
seq48655 100 2e-16
seq24048 82.4 6e-11
>seq37467
Length=38624
Score = 167 bits (184), Expect = 2e-36
Identities = 137/167 (82%), Gaps = 0/167 (0%)
Strand=Plus/Minus
Query 29939 TCTAGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAG 29998
|| ||||| |||| ||| || |||||||| ||||| || ||||||||||| ||||| |||
Sbjct 3635 TCCAGCCCTGTGATGTGGGCAATCATGTAGGTGAGCAGTGAGTAGCTGGCAATGTTGAAG 3576
Query 29999 GGTACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCGTCG 30058
|| || || || ||||||||||| ||||||||||||||||| || ||||| || || |
Sbjct 3575 GGCACTCCCAGTCCCATGTCCCCAGACCTCTGGTAGAGCTGGCAGGAGAGTTCACCCTTC 3516
Query 30059 CTCACGTAAAACTGACACATGGCGTGGCACGGAGGAAGAGCCATGAG 30105
|||||| ||||| |||| |||||||||||| || |||||||| ||
Sbjct 3515 AGCACGTAGAACTGGCACAGGGCGTGGCACGGGGGCAGAGCCATCAG 3469
Score = 156 bits (172), Expect = 3e-33
Identities = 148/184 (80%), Gaps = 4/184 (2%)
Strand=Plus/Minus
Query 30223 CATGTCCGTGTACTCTGCTCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTC 30282
||||||| |||| |||||||| || |||||||||||||| || ||||| || ||||||||
Sbjct 1603 CATGTCCTTGTAGTCTGCTCCAAAGTGCCTCCACTGGAAGCCATACACTGGCCCCAGGTC 1544
Query 30283 TCCCTCTTCCCTGT-GCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGT 30341
||||| |||||| ||| ||||||| |||||||| || || | ||| ||||| ||||
Sbjct 1543 CCCCTCCTCCCTGGAGCT-GAAGCCCTGCTTGTCCAGGAACTCCCGGGACCCGTTAGCGT 1485
Query 30342 CCCAGATCTTTACCCCCTTCTCAGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACC 30401
|||||||||| || || || |||||||||| |||| ||||| || || || || || |
Sbjct 1484 CCCAGATCTTCACACCTTTTGCAGAGAGCTCCTTGGCATTTGTAGAGCC-CT-ACAAAAC 1427
Query 30402 ACAG 30405
||||
Sbjct 1426 ACAG 1423
>seq48655
Length=27788
Score = 100 bits (110), Expect = 2e-16
Identities = 87/108 (81%), Gaps = 0/108 (0%)
Strand=Plus/Plus
Query 110401 TTAAGCTCCCTGCTGAGGACTACGTTTATCCTGTCTCTCAGAGGTCTATTCTTTTCGGGG 110460
|| |||||||||||||| |||| ||||| |||||| | | ||| | |||||| || ||
Sbjct 25035 TTGAGCTCCCTGCTGAGTACTATATTTATTCTGTCTTTTAAAGGACGATTCTTCTCAGGA 25094
Query 110461 ATGGAGAACCAAGTCTTTCTACCCATTATCACCACGTTCTGCTTGCCT 110508
||||||||||| || ||| |||||||||||| ||||||| || |||
Sbjct 25095 ATGGAGAACCAGGTTTTTTTACCCATTATCAGTGCGTTCTGTTTACCT 25142
>seq24048
Length=19116
Score = 82.4 bits (90), Expect = 6e-11
Identities = 110/143 (77%), Gaps = 10/143 (7%)
Strand=Plus/Plus
Query 52770 GGCGACAAGTTTGC--GTCGTTCACGGCGCAAAAGGGGACGTGCGGAGCCGTC-CTGACC 52826
|| ||||||||||| | ||| ||||| || ||||| | | | ||||| | ||| ||
Sbjct 17442 GGAGACAAGTTTGCCAGCCGT-CACGGA-CAGAAGGGTA--TCCTGAGCCAGCTCTGGCC 17497
Query 52827 CA-GGAGGACATGCCCTTCGACA-AGGACGGGGTGGTGCCCGACCTCATCATCAACCCCC 52884
|||||||||||||||| ||| || |||| |||| || ||| || || |||||||||
Sbjct 17498 AGTGGAGGACATGCCCTTC-ACAGAGAACGGCATGGTCCCAGACATCCTCTTCAACCCCC 17556
Query 52885 ACGCCTTTCCCTCCAGGATGACC 52907
||| |||||||||| | ||||||
Sbjct 17557 ACGGCTTTCCCTCCCGCATGACC 17579
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 406045477873908
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |