Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Merops_20nubicus_20[refseq_20GCF_5F000691845.1_202014-05-16]
53,499 sequences; 1,062,961,556 total letters
Query= NC_029132.1
Length=140122
Score E
Sequences producing significant alignments: (Bits) Value
seq37467 147 2e-30
>seq37467
Length=38624
Score = 147 bits (162), Expect = 2e-30
Identities = 129/161 (80%), Gaps = 0/161 (0%)
Strand=Plus/Plus
Query 34565 GATCTCCCTCTGATGGCGCTCCCCCCGTGCCACACCCTCTGCCAATTCTACGTCGCGAAT 34624
||||| |||||||||| || |||||||||||| |||| ||||| |||||||| |||
Sbjct 3460 GATCTGTCTCTGATGGCTCTGCCCCCGTGCCACGCCCTGTGCCAGTTCTACGTGCTGAAG 3519
Query 34625 GGGGAGCTGTCCTGCCAGCTCTATCAACGATCGGGAGACATGGGGTTAGGGGTGCCGTTC 34684
|| || || |||||||||||||| || | || || |||||||| | || ||||| |||
Sbjct 3520 GGTGAACTCTCCTGCCAGCTCTACCAGAGGTCTGGGGACATGGGACTGGGAGTGCCCTTC 3579
Query 34685 AACATTGCTAGTTACGCTCTGCTCACGTACATGATCGCTCA 34725
|||||||| || ||| | |||||||| |||||||| || ||
Sbjct 3580 AACATTGCCAGCTACTCACTGCTCACCTACATGATTGCCCA 3620
Score = 147 bits (162), Expect = 2e-30
Identities = 129/161 (80%), Gaps = 0/161 (0%)
Strand=Plus/Minus
Query 6620 TGAGCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACGGCACCCCTAACCCC 6679
|| || |||||||| |||||||| | ||| || ||||||||||| ||||| || | |||
Sbjct 3620 TGGGCAATCATGTAGGTGAGCAGTGAGTAGCTGGCAATGTTGAAGGGCACTCCCAGTCCC 3561
Query 6680 ATGTCTCCCGATCGTTGATAGAGCTGGCAGGACAGCTCCCCATTCGCGACGTAGAATTGG 6739
||||| || || | || |||||||||||||| || || || ||| |||||||| |||
Sbjct 3560 ATGTCCCCAGACCTCTGGTAGAGCTGGCAGGAGAGTTCACCCTTCAGCACGTAGAACTGG 3501
Query 6740 CAGAGGGTGTGGCACGGGGGGAGCGCCATCAGAGGGAGATC 6780
|| |||| |||||||||||| || |||||||||| |||||
Sbjct 3500 CACAGGGCGTGGCACGGGGGCAGAGCCATCAGAGACAGATC 3460
Score = 127 bits (140), Expect = 2e-24
Identities = 115/145 (79%), Gaps = 0/145 (0%)
Strand=Plus/Plus
Query 34302 CCAAGGAGCTCTCGTCCCGGGGGGTGAAGATCTGGGACGCTCACGGGTCTCGAGACTTTC 34361
||||||||||||| | || |||||||||||||||||| ||||||| || || || |
Sbjct 1449 CCAAGGAGCTCTCTGCAAAAGGTGTGAAGATCTGGGACGCTAACGGGTCCCGGGAGTTCC 1508
Query 34362 TGGACAAGCGGGGGTTCCCATCTCGGGAGGAGGGCGACTTGGGCCCGGTCTACGGGTTCC 34421
||||||||| ||| ||| || |||||||||| ||| |||| || || || || ||||
Sbjct 1509 TGGACAAGCAGGGCTTCAGCTCCAGGGAGGAGGGGGACCTGGGGCCAGTGTATGGCTTCC 1568
Query 34422 AGTGGAGACACTTTGGGGCGGAGTA 34446
||||||| |||||||| || || ||
Sbjct 1569 AGTGGAGGCACTTTGGAGCAGACTA 1593
Score = 127 bits (140), Expect = 2e-24
Identities = 115/145 (79%), Gaps = 0/145 (0%)
Strand=Plus/Minus
Query 6899 TACTCCGCCCCAAAGTGTCTCCACTGGAACCCGTAGACCGGGCCCAAGTCGCCCTCCTCC 6958
|| || || |||||||| ||||||||||| || || || || |||| ||| |||||||||
Sbjct 1593 TAGTCTGCTCCAAAGTGCCTCCACTGGAAGCCATACACTGGCCCCAGGTCCCCCTCCTCC 1534
Query 6959 CGAGATGGGAACCCCCGCTTGTCCAGAAAGTCTCGAGACCCGTGAGCGTCCCAGATCTTC 7018
| || ||| ||| |||||||||| || || || ||||||| ||||||||||||||||
Sbjct 1533 CTGGAGCTGAAGCCCTGCTTGTCCAGGAACTCCCGGGACCCGTTAGCGTCCCAGATCTTC 1474
Query 7019 ACCCCCCGGGACGAGAGCTCCTTGG 7043
|| || | |||||||||||||
Sbjct 1473 ACACCTTTTGCAGAGAGCTCCTTGG 1449
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 447962630123280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |