Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Merops_20nubicus_20[refseq_20GCF_5F000691845.1_202014-05-16] 53,499 sequences; 1,062,961,556 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq37467 147 2e-30 >seq37467 Length=38624 Score = 147 bits (162), Expect = 2e-30 Identities = 129/161 (80%), Gaps = 0/161 (0%) Strand=Plus/Plus Query 34565 GATCTCCCTCTGATGGCGCTCCCCCCGTGCCACACCCTCTGCCAATTCTACGTCGCGAAT 34624 ||||| |||||||||| || |||||||||||| |||| ||||| |||||||| ||| Sbjct 3460 GATCTGTCTCTGATGGCTCTGCCCCCGTGCCACGCCCTGTGCCAGTTCTACGTGCTGAAG 3519 Query 34625 GGGGAGCTGTCCTGCCAGCTCTATCAACGATCGGGAGACATGGGGTTAGGGGTGCCGTTC 34684 || || || |||||||||||||| || | || || |||||||| | || ||||| ||| Sbjct 3520 GGTGAACTCTCCTGCCAGCTCTACCAGAGGTCTGGGGACATGGGACTGGGAGTGCCCTTC 3579 Query 34685 AACATTGCTAGTTACGCTCTGCTCACGTACATGATCGCTCA 34725 |||||||| || ||| | |||||||| |||||||| || || Sbjct 3580 AACATTGCCAGCTACTCACTGCTCACCTACATGATTGCCCA 3620 Score = 147 bits (162), Expect = 2e-30 Identities = 129/161 (80%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 6620 TGAGCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACGGCACCCCTAACCCC 6679 || || |||||||| |||||||| | ||| || ||||||||||| ||||| || | ||| Sbjct 3620 TGGGCAATCATGTAGGTGAGCAGTGAGTAGCTGGCAATGTTGAAGGGCACTCCCAGTCCC 3561 Query 6680 ATGTCTCCCGATCGTTGATAGAGCTGGCAGGACAGCTCCCCATTCGCGACGTAGAATTGG 6739 ||||| || || | || |||||||||||||| || || || ||| |||||||| ||| Sbjct 3560 ATGTCCCCAGACCTCTGGTAGAGCTGGCAGGAGAGTTCACCCTTCAGCACGTAGAACTGG 3501 Query 6740 CAGAGGGTGTGGCACGGGGGGAGCGCCATCAGAGGGAGATC 6780 || |||| |||||||||||| || |||||||||| ||||| Sbjct 3500 CACAGGGCGTGGCACGGGGGCAGAGCCATCAGAGACAGATC 3460 Score = 127 bits (140), Expect = 2e-24 Identities = 115/145 (79%), Gaps = 0/145 (0%) Strand=Plus/Plus Query 34302 CCAAGGAGCTCTCGTCCCGGGGGGTGAAGATCTGGGACGCTCACGGGTCTCGAGACTTTC 34361 ||||||||||||| | || |||||||||||||||||| ||||||| || || || | Sbjct 1449 CCAAGGAGCTCTCTGCAAAAGGTGTGAAGATCTGGGACGCTAACGGGTCCCGGGAGTTCC 1508 Query 34362 TGGACAAGCGGGGGTTCCCATCTCGGGAGGAGGGCGACTTGGGCCCGGTCTACGGGTTCC 34421 ||||||||| ||| ||| || |||||||||| ||| |||| || || || || |||| Sbjct 1509 TGGACAAGCAGGGCTTCAGCTCCAGGGAGGAGGGGGACCTGGGGCCAGTGTATGGCTTCC 1568 Query 34422 AGTGGAGACACTTTGGGGCGGAGTA 34446 ||||||| |||||||| || || || Sbjct 1569 AGTGGAGGCACTTTGGAGCAGACTA 1593 Score = 127 bits (140), Expect = 2e-24 Identities = 115/145 (79%), Gaps = 0/145 (0%) Strand=Plus/Minus Query 6899 TACTCCGCCCCAAAGTGTCTCCACTGGAACCCGTAGACCGGGCCCAAGTCGCCCTCCTCC 6958 || || || |||||||| ||||||||||| || || || || |||| ||| ||||||||| Sbjct 1593 TAGTCTGCTCCAAAGTGCCTCCACTGGAAGCCATACACTGGCCCCAGGTCCCCCTCCTCC 1534 Query 6959 CGAGATGGGAACCCCCGCTTGTCCAGAAAGTCTCGAGACCCGTGAGCGTCCCAGATCTTC 7018 | || ||| ||| |||||||||| || || || ||||||| |||||||||||||||| Sbjct 1533 CTGGAGCTGAAGCCCTGCTTGTCCAGGAACTCCCGGGACCCGTTAGCGTCCCAGATCTTC 1474 Query 7019 ACCCCCCGGGACGAGAGCTCCTTGG 7043 || || | ||||||||||||| Sbjct 1473 ACACCTTTTGCAGAGAGCTCCTTGG 1449 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 447962630123280