Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Merops_20nubicus_20[refseq_20GCF_5F000691845.1_202014-05-16] 53,499 sequences; 1,062,961,556 total letters Query= NC_030842.1 Length=115510 Score E Sequences producing significant alignments: (Bits) Value seq37467 158 9e-34 >seq37467 Length=38624 Score = 158 bits (174), Expect = 9e-34 Identities = 135/167 (81%), Gaps = 0/167 (0%) Strand=Plus/Minus Query 27205 TCTAGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAG 27264 || ||||| |||| ||| || |||||||| ||||| || ||||||||||| ||||| ||| Sbjct 3635 TCCAGCCCTGTGATGTGGGCAATCATGTAGGTGAGCAGTGAGTAGCTGGCAATGTTGAAG 3576 Query 27265 GGTACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCATCG 27324 || || || || ||||||||||| ||||||||||||||||| || ||||| || || | Sbjct 3575 GGCACTCCCAGTCCCATGTCCCCAGACCTCTGGTAGAGCTGGCAGGAGAGTTCACCCTTC 3516 Query 27325 CTTACGTAAAACTGACATATGGCGTGGCACGGAGGAAGAGCCATGAG 27371 ||||| ||||| || | |||||||||||| || |||||||| || Sbjct 3515 AGCACGTAGAACTGGCACAGGGCGTGGCACGGGGGCAGAGCCATCAG 3469 Score = 147 bits (162), Expect = 2e-30 Identities = 146/184 (79%), Gaps = 4/184 (2%) Strand=Plus/Minus Query 27489 CATGTCCGTGTACTCTGCTCCGAAATGCCTCCATTGGAACCCGTACACCGGTCCCAGGTC 27548 ||||||| |||| |||||||| || |||||||| ||||| || ||||| || |||||||| Sbjct 1603 CATGTCCTTGTAGTCTGCTCCAAAGTGCCTCCACTGGAAGCCATACACTGGCCCCAGGTC 1544 Query 27549 TCCCTCTTCCCTGT-GCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGT 27607 ||||| |||||| ||| ||||||| |||||||| || || | ||| ||||| |||| Sbjct 1543 CCCCTCCTCCCTGGAGCT-GAAGCCCTGCTTGTCCAGGAACTCCCGGGACCCGTTAGCGT 1485 Query 27608 CCCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACC 27667 |||||||||| || || || | |||||||| |||| ||||| || || || || || | Sbjct 1484 CCCAGATCTTCACACCTTTTGCAGAGAGCTCCTTGGCATTTGTAGAGCC-CT-ACAAAAC 1427 Query 27668 ACAG 27671 |||| Sbjct 1426 ACAG 1423 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 369266274261869