Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Merops_20nubicus_20[refseq_20GCF_5F000691845.1_202014-05-16]
53,499 sequences; 1,062,961,556 total letters
Query= NC_031033.1
Length=217124
Score E
Sequences producing significant alignments: (Bits) Value
seq43608 102 1e-16
seq36225 102 1e-16
seq26544 89.7 7e-13
>seq43608
Length=19049
Score = 102 bits (112), Expect = 1e-16
Identities = 94/119 (79%), Gaps = 0/119 (0%)
Strand=Plus/Minus
Query 48165 TCATCTCTACTAATTAATTCGTTAGAAAATGTGAGACCGGGCATTAGTCCACGTTTTTTG 48224
|||||||| || || | ||| |||||||| ||||| || ||||||| ||| | ||| ||
Sbjct 3255 TCATCTCTGCTGATAAGTTCATTAGAAAAAGTGAGTCCAGGCATTAATCCTCTTTTCTTC 3196
Query 48225 AGCCAAAATATTGCCGCGAAAGATCCAGAAAAGAATATGCCTTCTACGGCCGCAAATGC 48283
|||||||| || | || ||||| ||||||||||| || ||||| || || ||||| ||
Sbjct 3195 AGCCAAAAAATAGATGCAAAAGAGCCAGAAAAGAAGATTCCTTCCACTGCTGCAAAAGC 3137
Score = 100 bits (110), Expect = 4e-16
Identities = 88/110 (80%), Gaps = 0/110 (0%)
Strand=Plus/Minus
Query 47835 GACATAACTCCCATTTTTTGATATTCACCCACACGTTTCTCGAAAAAATTAGTTTTGCCT 47894
||||| |||||||| | ||||||||||||||||| ||||| || ||||| || ||||||
Sbjct 4508 GACATGACTCCCATCCTCTGATATTCACCCACACGCTTCTCAAAGAAATTGGTCTTGCCT 4449
Query 47895 TCCAATGATATATTTTCCATAAAATCAAATGGATTAACTGCATTATAAAT 47944
|||| || || || ||||| || ||||| ||||| |||| || || ||
Sbjct 4448 TCCAGAGAGATGTTCTCCATGAAGTCAAAAGGATTCTCTGCTTTGTAGAT 4399
>seq36225
Length=28417
Score = 102 bits (112), Expect = 1e-16
Identities = 104/136 (76%), Gaps = 0/136 (0%)
Strand=Plus/Minus
Query 76849 TCCATCCGTAGAAATGCATGCTTGTCAGTTTGGAATAACTAGGATCGGCTATATGAATAT 76908
|||| |||||||| |||||||| || |||||| ||| | || ||||| || || || |
Sbjct 17208 TCCAGCCGTAGAAGTGCATGCTGGTGAGTTTGCCATAGTTGGGTTCGGCGATGTGGATGT 17149
Query 76909 TCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGCCATTTTTATAATGGTCT 76968
| | ||||| || |||||||||||||||||||| || || ||||| || | ||||| |
Sbjct 17148 TGAGAGACTGGCTCTGATCGATGAAAGCTCCTCTGTCCGCTGCCATCTTGAGGATGGTTT 17089
Query 76969 TTTGAGGAATTTCCCA 76984
| || | || |||||
Sbjct 17088 TCTGGGAGATCTCCCA 17073
Score = 86.0 bits (94), Expect = 9e-12
Identities = 97/130 (75%), Gaps = 0/130 (0%)
Strand=Plus/Minus
Query 77733 ATCTCGGTACATAGATTACTACATTTGATAGTGCCCAGATTTTGTTGGTTGCTCTTTTTA 77792
|||||||| || || || || || ||||| |||||||| || || |||||||||||
Sbjct 9945 ATCTCGGTGCAGAGGTTGCTGCACTTGATGGTGCCCAGGTTCTGCTGGTTGCTCTTGCGG 9886
Query 77793 TTGCATGAGTCCTTATAAAGAATAAACGGAGTCCCGGTTTCAATCTGTGATTCGATAATA 77852
||||| |||||||| || || || | || || ||||| || |||| || ||||| ||
Sbjct 9885 TTGCAGGAGTCCTTGTAGAGCATGTAGGGGGTGCCGGTCTCGGTCTGCGACTCGATGATG 9826
Query 77853 GATTTCCAGA 77862
| | |||||
Sbjct 9825 GCGTACCAGA 9816
Score = 84.2 bits (92), Expect = 3e-11
Identities = 110/150 (73%), Gaps = 2/150 (1%)
Strand=Plus/Minus
Query 78002 AACTCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATG 78061
||| || ||||| ||||||||||| ||||| || |||| || || ||||||| || ||
Sbjct 8183 AACCCGCTTCATGAAGAGATCAGGGATCCAGAGGGCAAAGAAAAGGTCTCGGGCTCGCTG 8124
Query 78062 TTCTTCATTTCCTGTATTCTT-TTTAAGATCGAGAAACTCCATAATATCAGAATGCCATG 78120
||||| || || || ||||| |||||| || || ||||| | || || |||||| |
Sbjct 8123 CTCTTCTTTCCCAGTGTTCTTCTTTAAG-TCAAGGAACTCAAAGATGTCCAGATGCCACG 8065
Query 78121 GTTCTAGATATATTGCCATAACTCCAGGTC 78150
| || | || || || | | | |||||||
Sbjct 8064 GCTCCAAGTAGATGGCAAAAGCCCCAGGTC 8035
>seq26544
Length=14703
Score = 89.7 bits (98), Expect = 7e-13
Identities = 91/119 (76%), Gaps = 0/119 (0%)
Strand=Plus/Plus
Query 48165 TCATCTCTACTAATTAATTCGTTAGAAAATGTGAGACCGGGCATTAGTCCACGTTTTTTG 48224
|||||||| ||||| | ||| || || || || || || ||||| || || | || ||
Sbjct 8180 TCATCTCTGCTAATGAGTTCATTGGAGAAAGTCAGTCCAGGCATCAGGCCCCTCTTCTTC 8239
Query 48225 AGCCAAAATATTGCCGCGAAAGATCCAGAAAAGAATATGCCTTCTACGGCCGCAAATGC 48283
||||||||||| || || || || || |||||||| |||||||| || || ||||| ||
Sbjct 8240 AGCCAAAATATAGCAGCAAAGGAACCCGAAAAGAAGATGCCTTCAACTGCAGCAAAGGC 8298
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 694204248923360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |