Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Merops_20nubicus_20[refseq_20GCF_5F000691845.1_202014-05-16]
53,499 sequences; 1,062,961,556 total letters
Query= NC_031465.1
Length=360610
Score E
Sequences producing significant alignments: (Bits) Value
seq51860 123 6e-23
>seq51860
Length=4005
Score = 123 bits (136), Expect = 6e-23
Identities = 157/215 (73%), Gaps = 6/215 (3%)
Strand=Plus/Plus
Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952
|| |||||||| ||||| ||||| || ||||||||||| |||| | || | ||||||
Sbjct 3212 AGCACAAGATGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGTCCATCT 3271
Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012
|| || || || || ||||| ||||||||||| || | | ||| |||||||| ||
Sbjct 3272 TCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCGGGGGGGATACCTTCCTTGTCC 3331
Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTCAAGAGTAATA 152069
|| || || || ||| |||| | | |||| ||| ||| ||||| || || ||
Sbjct 3332 TGGATCTTAGCCTTCACATTCTCAATGGTGTC---ACTGGGCTCAACTTCCAGGGTGATT 3388
Query 152070 GTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|| ||||| || || |||||||| |||| ||||||
Sbjct 3389 GTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCAT 3423
Score = 118 bits (130), Expect = 2e-21
Identities = 156/215 (73%), Gaps = 6/215 (3%)
Strand=Plus/Plus
Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952
|| |||||||| ||||| ||||| || ||||||||||| |||| | || | ||||||
Sbjct 3440 AGCACAAGATGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGTCCATCT 3499
Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012
|| || || || || ||||| ||||||||||| || | | ||| |||||||| ||
Sbjct 3500 TCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCGGGGGGGATACCTTCCTTGTCC 3559
Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTCAAGAGTAATA 152069
|| || || || ||| |||| | | |||| ||| ||| ||||| || || ||
Sbjct 3560 TGGATCTTGGCCTTCACATTCTCGATGGTGTC---ACTGGGCTCAACTTCCAGGGTGATT 3616
Query 152070 GTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|| ||||| || || || ||||| |||| ||||||
Sbjct 3617 GTCTTGCCAGTCAGGGTTTTCACAAAGATCTGCAT 3651
Score = 113 bits (124), Expect = 1e-19
Identities = 155/214 (72%), Gaps = 7/214 (3%)
Strand=Plus/Plus
Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956
|||| || || || || || || ||||||||||| |||| | || | |||||||| |
Sbjct 3673 CAAG-TGCAGGGTGGATTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGTCCATCTTCCA 3731
Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016
| || || || ||||| ||||||||||| || | | ||| |||||||| || || |
Sbjct 3732 GCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCGGGGGGGATACCTTCCTTGTCCTGGA 3791
Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTCAAGAGTAATAGTTT 152073
| || || ||| |||| | | |||| ||| ||| ||||| || ||||| || |
Sbjct 3792 TCTTGGCCTTCACATTCTCGATGGTGTC---ACTGGGCTCAACTTCCAGGGTAATGGTCT 3848
Query 152074 TGCCCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107
| || || || ||||||||||||| |||||||||
Sbjct 3849 TACCAGTTAGGGTCTTCACGAAGATCTGCATTTT 3882
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1153029906681829
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |