Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Merops_20nubicus_20[refseq_20GCF_5F000691845.1_202014-05-16] 53,499 sequences; 1,062,961,556 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq43608 98.7 1e-15 seq16918 82.4 8e-11 >seq43608 Length=19049 Score = 98.7 bits (108), Expect = 1e-15 Identities = 99/129 (77%), Gaps = 0/129 (0%) Strand=Plus/Minus Query 23533 TCATCCCTACTAATCAATTCATTAGAAAATGTTAATCCTGGCATTAATCCTCGTTTTTTA 23592 ||||| || || || | |||||||||||| || | ||| ||||||||||||| ||| || Sbjct 3255 TCATCTCTGCTGATAAGTTCATTAGAAAAAGTGAGTCCAGGCATTAATCCTCTTTTCTTC 3196 Query 23593 ATCCAAAATATTGCAGCAAATGATCCGGAAAAGAAAATACCCTCAACAGCCGCAAAGGCC 23652 | |||||| || | ||||| || || |||||||| || || || || || ||||| || Sbjct 3195 AGCCAAAAAATAGATGCAAAAGAGCCAGAAAAGAAGATTCCTTCCACTGCTGCAAAAGCT 3136 Query 23653 ACAAGACGT 23661 || | |||| Sbjct 3135 ACTACACGT 3127 >seq16918 Length=29524 Score = 82.4 bits (90), Expect = 8e-11 Identities = 68/83 (82%), Gaps = 0/83 (0%) Strand=Plus/Minus Query 139438 CATACAAAATTTTGGATTGTTGATAATAAACATATATATATTGGAAGTGCTAACATGGAC 139497 |||| ||||| |||||||| || | ||||||||||||||||| ||||| || |||||| Sbjct 17867 CATAGCAAATTCTGGATTGTAGACATGAAACATATATATATTGGTAGTGCAAATATGGAC 17808 Query 139498 TGGCGATCACTAACTCAAGTAAA 139520 ||| |||| || |||| ||||| Sbjct 17807 TGGAGATCTTTATCTCAGGTAAA 17785 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521139261418600