Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Merops_20nubicus_20[refseq_20GCF_5F000691845.1_202014-05-16]
53,499 sequences; 1,062,961,556 total letters
Query= NC_033775.1
Length=376207
Score E
Sequences producing significant alignments: (Bits) Value
seq51860 136 1e-26
>seq51860
Length=4005
Score = 136 bits (150), Expect = 1e-26
Identities = 164/221 (74%), Gaps = 4/221 (2%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAG-- 177981
|| || || |||||||| || || || || || |||||||| || || || || |||
Sbjct 3648 CAGATCTTTGTGAAAACCCTGACTGGCAAGACAATCACCCTGGAAGTTGA--GCCCAGTG 3591
Query 177982 ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC 178041
||||||||||||| || || ||||| |||||||| ||||| ||||| || || ||||
Sbjct 3590 ACACCATCGAGAATGTGAAGGCCAAGATCCAGGACAAGGAAGGTATCCCCCCCGATCAGC 3531
Query 178042 AACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACG 178101
| | || ||||| || || || ||||| ||||||||| | || || |||| || |||
Sbjct 3530 AGAGGCTGATCTTTGCTGGCAAGCAGCTGGAAGATGGACGCACCCTGTCCGACTACAACA 3471
Query 178102 TCCAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142
|||| || || || || || |||||||| || | || |||
Sbjct 3470 TCCAGAAGGAGTCCACTCTCCATCTTGTGCTGCGCCTGAGA 3430
Score = 131 bits (144), Expect = 4e-25
Identities = 161/216 (75%), Gaps = 8/216 (4%)
Strand=Plus/Minus
Query 177915 AAAATGCTCCAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA 177974
||||||| | || |||||||| || || || || || || || ||||| || || ||
Sbjct 3882 AAAATGC---AGATCTTCGTGAAGACCCTAACTGGTAAGACCATTACCCTGGAAGTTGA- 3827
Query 177975 AGCTCAG--ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTC 178032
|| ||| ||||||||||||| || || ||||| |||||||| ||||| ||||| |
Sbjct 3826 -GCCCAGTGACACCATCGAGAATGTGAAGGCCAAGATCCAGGACAAGGAAGGTATCCCCC 3768
Query 178033 CGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCG 178092
| || ||||| | || ||||| || || || ||||| ||||||||| | || || |||
Sbjct 3767 CCGATCAGCAGAGGCTGATCTTTGCTGGCAAGCAGCTGGAAGATGGACGCACCCTGTCCG 3708
Query 178093 ATTATAACGTCCAAAAAGAATCAACACTGCATCTTG 178128
| || ||| |||| || ||||| || ||||| ||||
Sbjct 3707 ACTACAACATCCAGAAGGAATCCACCCTGCA-CTTG 3673
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1202906095301806
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |