Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Merops_20nubicus_20[refseq_20GCF_5F000691845.1_202014-05-16] 53,499 sequences; 1,062,961,556 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq51860 136 1e-26 >seq51860 Length=4005 Score = 136 bits (150), Expect = 1e-26 Identities = 164/221 (74%), Gaps = 4/221 (2%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAG-- 177981 || || || |||||||| || || || || || |||||||| || || || || ||| Sbjct 3648 CAGATCTTTGTGAAAACCCTGACTGGCAAGACAATCACCCTGGAAGTTGA--GCCCAGTG 3591 Query 177982 ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC 178041 ||||||||||||| || || ||||| |||||||| ||||| ||||| || || |||| Sbjct 3590 ACACCATCGAGAATGTGAAGGCCAAGATCCAGGACAAGGAAGGTATCCCCCCCGATCAGC 3531 Query 178042 AACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACG 178101 | | || ||||| || || || ||||| ||||||||| | || || |||| || ||| Sbjct 3530 AGAGGCTGATCTTTGCTGGCAAGCAGCTGGAAGATGGACGCACCCTGTCCGACTACAACA 3471 Query 178102 TCCAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142 |||| || || || || || |||||||| || | || ||| Sbjct 3470 TCCAGAAGGAGTCCACTCTCCATCTTGTGCTGCGCCTGAGA 3430 Score = 131 bits (144), Expect = 4e-25 Identities = 161/216 (75%), Gaps = 8/216 (4%) Strand=Plus/Minus Query 177915 AAAATGCTCCAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA 177974 ||||||| | || |||||||| || || || || || || || ||||| || || || Sbjct 3882 AAAATGC---AGATCTTCGTGAAGACCCTAACTGGTAAGACCATTACCCTGGAAGTTGA- 3827 Query 177975 AGCTCAG--ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTC 178032 || ||| ||||||||||||| || || ||||| |||||||| ||||| ||||| | Sbjct 3826 -GCCCAGTGACACCATCGAGAATGTGAAGGCCAAGATCCAGGACAAGGAAGGTATCCCCC 3768 Query 178033 CGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCG 178092 | || ||||| | || ||||| || || || ||||| ||||||||| | || || ||| Sbjct 3767 CCGATCAGCAGAGGCTGATCTTTGCTGGCAAGCAGCTGGAAGATGGACGCACCCTGTCCG 3708 Query 178093 ATTATAACGTCCAAAAAGAATCAACACTGCATCTTG 178128 | || ||| |||| || ||||| || ||||| |||| Sbjct 3707 ACTACAACATCCAGAAGGAATCCACCCTGCA-CTTG 3673 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1202906095301806