Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nannopterum_20auritus_20[genbank_20GCA_5F002173455.1_202017-06-06] 27,523 sequences; 1,246,050,644 total letters Query= NC_002229.3 Length=177874 Score E Sequences producing significant alignments: (Bits) Value seq214 181 1e-40 >seq214 Length=2310827 Score = 181 bits (200), Expect = 1e-40 Identities = 168/211 (80%), Gaps = 18/211 (9%) Strand=Plus/Plus Query 139498 GCCGCGCGTGTGGGAGCGACGCCGTCCGCGCGC--CCCACGGCGCAggggggcgcggggg 139555 ||||||||||| |||||| ||||| |||||||| |||||||| |||| |||||| || Sbjct 2310237 GCCGCGCGTGTCGGAGCGGCGCCGGCCGCGCGCGCCCCACGGCTGAGGGAAGCGCGGCGG 2310296 Query 139556 --ttgccccgggggcgccgctcccgtgttgctctgctgggg----------gcgcggggc 139603 || ||||| |||||||||||||| |||||||||||||| |||||||| Sbjct 2310297 GTTTATCCCGGCGGCGCCGCTCCCGTTTTGCTCTGCTGGGGTCCCCCGCGGGCGCGGGGG 2310356 Query 139604 cgcgcgcCGCATCTCCCGGGCGCC---GCCGAGGCTGACAGAGGCGAACTCTTCGCGGCG 139660 ||| || | |||||| |||| |||||||||||||||| ||| |||||||||||| Sbjct 2310357 CGCCTCCCTCCATTCCCGGCCGCCGCCGCCGAGGCTGACAGAGACGAGCTCTTCGCGGCG 2310416 Query 139661 GCAATGGC-GGGTGCCGGCCGACCGCGGCCT 139690 ||| |||| ||| |||||||||||||||||| Sbjct 2310417 GCAGTGGCGGGGAGCCGGCCGACCGCGGCCT 2310447 Score = 181 bits (200), Expect = 1e-40 Identities = 168/211 (80%), Gaps = 18/211 (9%) Strand=Plus/Minus Query 1930 AGGCCGCGGTCGGCCGGCACCC-GCCATTGCCGCCGCGAAGAGTTCGCCTCTGTCAGCCT 1988 |||||||||||||||||| ||| |||| ||||||||||||||| ||| |||||||||||| Sbjct 2310447 AGGCCGCGGTCGGCCGGCTCCCCGCCACTGCCGCCGCGAAGAGCTCGTCTCTGTCAGCCT 2310388 Query 1989 CGGC---GGCGCCCGGGAGATGCGgcgcgcggccccgcgc----------ccccagcaga 2035 |||| |||| |||||| | || ||| |||||||| |||||||||| Sbjct 2310387 CGGCGGCGGCGGCCGGGAATGGAGGGAGGCGCCCCCGCGCCCGCGGGGGACCCCAGCAGA 2310328 Query 2036 gcaacacgggagcggcgcccccggggcaa--cccccgcgccccccTGCGCCGTGGG--GC 2091 |||| |||||||||||||| ||||| || || |||||| |||| |||||||| || Sbjct 2310327 GCAAAACGGGAGCGGCGCCGCCGGGATAAACCCGCCGCGCTTCCCTCAGCCGTGGGGCGC 2310268 Query 2092 GCGCGGACGGCGTCGCTCCCACACGCGCGGC 2122 |||||| ||||| |||||| ||||||||||| Sbjct 2310267 GCGCGGCCGGCGCCGCTCCGACACGCGCGGC 2310237 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 568873018992720