Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nannopterum_20auritus_20[genbank_20GCA_5F002173455.1_202017-06-06] 27,523 sequences; 1,246,050,644 total letters Query= NC_002816.1 Length=123500 Score E Sequences producing significant alignments: (Bits) Value seq20 134 1e-26 seq44 109 4e-19 >seq20 Length=4226088 Score = 134 bits (148), Expect = 1e-26 Identities = 167/229 (73%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 45109 GCCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTT 45168 |||||| |||| | | |||| ||||| ||| ||||||||| |||||||||||| Sbjct 1306512 GCCACCCCTCAGGCGCAGCACCAGATGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGA 1306453 Query 45169 CAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGG 45228 || ||| |||| ||||| || || || || || ||||||| ||| || || || || Sbjct 1306452 AAGGGTGCGCCCGTCTTCCAGCTGCTTGCCAGCAAAGATCAACCTCTGCTGATCAGGCGG 1306393 Query 45229 CACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCAC 45288 | |||||||||||| || || ||| || | | | | |||| | ||| || Sbjct 1306392 AATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTCTCAATGGTGTCACTGGGCTCAAC 1306333 Query 45289 CTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCATG 45337 ||||| ||| || |||||||||||||| |||||||||||||| |||||| Sbjct 1306332 CTCCAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACAAAGATCTGCATG 1306284 Score = 134 bits (148), Expect = 1e-26 Identities = 167/229 (73%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 45109 GCCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTT 45168 |||||| |||| | | |||| ||||| ||| ||||||||| |||||||||||| Sbjct 1306740 GCCACCCCTCAGGCGCAGCACCAGATGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGA 1306681 Query 45169 CAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGG 45228 || ||| |||| ||||| || || || || || ||||||| ||| || || || || Sbjct 1306680 AAGGGTGCGCCCGTCTTCCAGCTGCTTGCCAGCAAAGATCAACCTCTGCTGATCAGGCGG 1306621 Query 45229 CACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCAC 45288 | |||||||||||| || || ||| || | | | | |||| | ||| || Sbjct 1306620 AATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTCTCAATGGTGTCACTGGGCTCAAC 1306561 Query 45289 CTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCATG 45337 ||||| ||| || |||||||||||||| |||||||||||||| |||||| Sbjct 1306560 CTCCAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACAAAGATCTGCATG 1306512 Score = 127 bits (140), Expect = 2e-24 Identities = 165/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 45110 CCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTC 45169 ||||| |||| | | |||| ||||| ||| |||||| || |||||||||||| Sbjct 1306967 CCACCCCTCAGGCGCAGCACCAGATGCAGGGTGGACTCCTTTTGGATGTTGTAGTCGGAA 1306908 Query 45170 AGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGC 45229 || ||| |||| ||||| || || || || || ||||||| ||| || || || || Sbjct 1306907 AGGGTGCGCCCGTCTTCCAGCTGCTTGCCAGCAAAGATCAACCTCTGCTGATCAGGCGGA 1306848 Query 45230 ACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACC 45289 | |||||||||||| || || ||| || | | | | |||| | ||| ||| Sbjct 1306847 ATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTCTCAATGGTGTCACTGGGCTCAACC 1306788 Query 45290 TCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCATG 45337 |||| ||| || |||||||||||||| |||||||||||||| |||||| Sbjct 1306787 TCCAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACAAAGATCTGCATG 1306740 Score = 125 bits (138), Expect = 6e-24 Identities = 170/236 (72%), Gaps = 1/236 (0%) Strand=Plus/Minus Query 45109 GCCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTT 45168 |||||| |||| | | |||| ||||| ||| ||||||||| ||||||||||| Sbjct 1306284 GCCACCCCTCAGGCGCAGCACCAGATGCAGAGTGGACTCCTTCTGGATGTTGTAGTCAGA 1306225 Query 45169 CAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGG 45228 ||| ||| |||| ||||| || || || || || |||| || ||| || || || || Sbjct 1306224 CAGGGTGCGCCCGTCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCAGGGGG 1306165 Query 45229 CACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCAC 45288 | || ||||||||| || || ||| || | | | | |||| | ||| || Sbjct 1306164 AATGCCTTCCTTGTCCTGGATCTTGGCCTTGACATTCTCAATGGTGTCACTGGGCTCAAC 1306105 Query 45289 CTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCATGTTGCCTC 45344 ||||| ||| || |||||||||||||| |||||||||||||| ||||| || |||| Sbjct 1306104 CTCCAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACAAAGATCTGCAT-TTTCCTC 1306050 >seq44 Length=2740361 Score = 109 bits (120), Expect = 4e-19 Identities = 141/195 (72%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 45146 TCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAAT 45205 |||||||| ||||||||||| ||| ||| | || ||||| || || || ||||| Sbjct 713082 TCCTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCGAAG 713141 Query 45206 ATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCC 45265 |||| || ||| || ||||| || | || ||||||||| || ||| ||| || | Sbjct 713142 ATCAGCCTCTGCTGATCGGGGGGAATGCCTTCCTTGTCCTGGATCTTTGCCTTCACATTC 713201 Query 45266 GCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACA 45325 | | | |||| | ||| ||||| | ||| || |||||||| ||||| ||||| ||| Sbjct 713202 TCAATGGTGTCACTGGGCTCGACCTCGAGGGTGATGGTCTTGCCGGTCAGGGTCTTTACA 713261 Query 45326 AAGATTTGCATGTTG 45340 ||||| ||||| ||| Sbjct 713262 AAGATCTGCATCTTG 713276 Score = 107 bits (118), Expect = 2e-18 Identities = 139/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 45146 TCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAAT 45205 |||||||| |||||||||||| ||| ||| | || ||||| || || || ||||| Sbjct 712854 TCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCGAAG 712913 Query 45206 ATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCC 45265 |||| || ||| || ||||| || | || ||||||||| || ||| ||| || | Sbjct 712914 ATCAGCCTCTGCTGATCGGGGGGAATGCCTTCCTTGTCCTGGATCTTTGCCTTCACATTC 712973 Query 45266 GCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACA 45325 | | | |||| | ||| ||||| | ||| || |||||||| |||| |||||||| Sbjct 712974 TCAATGGTGTCACTGGGCTCGACCTCAAGGGTGATGGTCTTGCCGGTCAAGGTCTTCACG 713033 Query 45326 AAGATTTGCATG 45337 ||||| |||||| Sbjct 713034 AAGATCTGCATG 713045 Score = 105 bits (116), Expect = 5e-18 Identities = 138/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 45146 TCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAAT 45205 |||||||| |||||||||||| ||| ||| | || ||||| || || || || || Sbjct 712170 TCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAG 712229 Query 45206 ATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCC 45265 |||| || ||| || ||||| || | || ||||||||| || ||| ||| || | Sbjct 712230 ATCAGCCTCTGCTGATCGGGGGGAATGCCTTCCTTGTCCTGGATCTTTGCCTTCACATTC 712289 Query 45266 GCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACA 45325 | | | |||| | ||| ||||| | ||| || ||||| || ||||| ||||||||| Sbjct 712290 TCAATGGTGTCACTGGGCTCGACCTCGAGGGTGATGGTCTTACCGGTCAGGGTCTTCACA 712349 Query 45326 AAGATTTGCAT 45336 ||||| ||||| Sbjct 712350 AAGATCTGCAT 712360 Score = 104 bits (114), Expect = 2e-17 Identities = 138/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 45146 TCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAAT 45205 |||||||| ||||||||||| ||| ||| | || ||||| || || || ||||| Sbjct 712626 TCCTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCGAAG 712685 Query 45206 ATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCC 45265 |||| || ||| || ||||| || | ||| ||||||||| || || || || | Sbjct 712686 ATCAGCCTCTGCTGATCGGGGGGAATACCTTCCTTGTCCTGGATCTTCGCTTTCACGTTC 712745 Query 45266 GCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACA 45325 | | | |||| | ||| ||||| | ||| || || ||||| ||||| ||||||||| Sbjct 712746 TCAATGGTGTCACTGGGCTCAACCTCGAGGGTGATGGTTTTGCCAGTCAGGGTCTTCACA 712805 Query 45326 AAGATTTGCATG 45337 ||||| |||||| Sbjct 712806 AAGATCTGCATG 712817 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 394942677332983