Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nannopterum_20auritus_20[genbank_20GCA_5F002173455.1_202017-06-06] 27,523 sequences; 1,246,050,644 total letters Query= NC_008035.3 Length=126629 Score E Sequences producing significant alignments: (Bits) Value seq20 109 4e-19 seq44 98.7 8e-16 >seq20 Length=4226088 Score = 109 bits (120), Expect = 4e-19 Identities = 156/218 (72%), Gaps = 4/218 (2%) Strand=Plus/Minus Query 16723 CAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTC 16782 ||| |||| |||||| ||||||||||| || ||||||||||| | || ||| |||| Sbjct 1306269 CAGCACCAGATGCAGAGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCGTC 1306210 Query 16783 CTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC 16842 |||| || ||||| ||| | || |||| ||| || || || | ||| || ||||| Sbjct 1306209 TTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCAGGGGGAATGCCTTCCTTGTC 1306150 Query 16843 --GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATG 16900 || || || ||| || | | | ||||| | |||||| |||| ||||||| Sbjct 1306149 CTGGATCTTGGC--CTTGACATTCTCAATGGTGTCACTGGGCTCAACCTCCAGGGTGATG 1306092 Query 16901 GTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATTTT 16938 || || || ||||| || || ||||| ||||||||||| Sbjct 1306091 GTCTTGCCCGTCAGGGTCTTCACAAAGATCTGCATTTT 1306054 Score = 109 bits (120), Expect = 4e-19 Identities = 169/237 (71%), Gaps = 7/237 (3%) Strand=Plus/Minus Query 16702 CATTTACC-CTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGT 16760 || ||||| | |||| || | ||| |||| |||||| |||||||||||||| ||||||| Sbjct 1306973 CAGTTACCACCCCTC--AGGCGCAGCACCAGATGCAGGGTGGACTCCTTTTGGATGTTGT 1306916 Query 16761 AGTCGGCCATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGT 16820 |||||| | ||| |||| |||| || ||||| ||| | || | || ||| || | Sbjct 1306915 AGTCGGAAAGGGTGCGCCCGTCTTCCAGCTGCTTGCCAGCAAAGATCAACCTCTGCTGAT 1306856 Query 16821 CCACAGGCACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCC 16878 | || | |||||| ||||| || || || ||| || | | | ||||| | Sbjct 1306855 CAGGCGGAATGCCCTCCTTGTCCTGGATCTTGGC--CTTGACATTCTCAATGGTGTCACT 1306798 Query 16879 GGGCTCCGTTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 |||||| |||| ||||||||| || || ||||| || || ||||| |||||||| Sbjct 1306797 GGGCTCAACCTCCAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACAAAGATCTGCAT 1306741 Score = 104 bits (114), Expect = 2e-17 Identities = 153/215 (71%), Gaps = 4/215 (2%) Strand=Plus/Minus Query 16723 CAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTC 16782 ||| |||| |||||| ||||||||||| || ||||||||||||| | ||| |||| Sbjct 1306497 CAGCACCAGATGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAAAGGGTGCGCCCGTC 1306438 Query 16783 CTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC 16842 |||| || ||||| ||| | || | || ||| || || || | |||||| ||||| Sbjct 1306437 TTCCAGCTGCTTGCCAGCAAAGATCAACCTCTGCTGATCAGGCGGAATGCCCTCCTTGTC 1306378 Query 16843 --GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATG 16900 || || || ||| || | | | ||||| | |||||| |||| ||||||| Sbjct 1306377 CTGGATCTTGGC--CTTGACATTCTCAATGGTGTCACTGGGCTCAACCTCCAGGGTGATG 1306320 Query 16901 GTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 || || || ||||| || || ||||| |||||||| Sbjct 1306319 GTCTTGCCCGTCAGGGTCTTCACAAAGATCTGCAT 1306285 Score = 104 bits (114), Expect = 2e-17 Identities = 153/215 (71%), Gaps = 4/215 (2%) Strand=Plus/Minus Query 16723 CAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTC 16782 ||| |||| |||||| ||||||||||| || ||||||||||||| | ||| |||| Sbjct 1306725 CAGCACCAGATGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAAAGGGTGCGCCCGTC 1306666 Query 16783 CTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC 16842 |||| || ||||| ||| | || | || ||| || || || | |||||| ||||| Sbjct 1306665 TTCCAGCTGCTTGCCAGCAAAGATCAACCTCTGCTGATCAGGCGGAATGCCCTCCTTGTC 1306606 Query 16843 --GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATG 16900 || || || ||| || | | | ||||| | |||||| |||| ||||||| Sbjct 1306605 CTGGATCTTGGC--CTTGACATTCTCAATGGTGTCACTGGGCTCAACCTCCAGGGTGATG 1306548 Query 16901 GTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 || || || ||||| || || ||||| |||||||| Sbjct 1306547 GTCTTGCCCGTCAGGGTCTTCACAAAGATCTGCAT 1306513 >seq44 Length=2740361 Score = 98.7 bits (108), Expect = 8e-16 Identities = 152/215 (71%), Gaps = 4/215 (2%) Strand=Plus/Plus Query 16723 CAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTC 16782 ||| || | ||| || || || ||||| || ||||||||||||| || ||| | | || Sbjct 712148 CAGCACAAGATGGAGAGTAGATTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATC 712207 Query 16783 CTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC 16842 |||| || ||||| ||| | || |||| ||| || || || | ||| || ||||| Sbjct 712208 TTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCGGGGGGAATGCCTTCCTTGTC 712267 Query 16843 --GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATG 16900 || ||||| |||||| | | | ||||| | |||||| || | ||||||| Sbjct 712268 CTGGATCTTTGC--CTTCACATTCTCAATGGTGTCACTGGGCTCGACCTCGAGGGTGATG 712325 Query 16901 GTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 || || |||||||| || || ||||| |||||||| Sbjct 712326 GTCTTACCGGTCAGGGTCTTCACAAAGATCTGCAT 712360 Score = 96.9 bits (106), Expect = 3e-15 Identities = 154/219 (70%), Gaps = 4/219 (2%) Strand=Plus/Plus Query 16723 CAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTC 16782 ||| || | ||| || ||||| ||||| || ||||||||||| | || ||| | | || Sbjct 713060 CAGCACAAGATGGAGGGTGGATTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCATC 713119 Query 16783 CTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC 16842 |||| || ||||| || | || |||| ||| || || || | ||| || ||||| Sbjct 713120 TTCCAGCTGCTTGCCAGCGAAGATCAGCCTCTGCTGATCGGGGGGAATGCCTTCCTTGTC 713179 Query 16843 --GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATG 16900 || ||||| |||||| | | | ||||| | |||||| || | ||||||| Sbjct 713180 CTGGATCTTTGC--CTTCACATTCTCAATGGTGTCACTGGGCTCGACCTCGAGGGTGATG 713237 Query 16901 GTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATTTTG 16939 || || |||||||| || || ||||| |||||||| ||| Sbjct 713238 GTCTTGCCGGTCAGGGTCTTTACAAAGATCTGCATCTTG 713276 Score = 89.7 bits (98), Expect = 4e-13 Identities = 150/215 (70%), Gaps = 4/215 (2%) Strand=Plus/Plus Query 16723 CAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTC 16782 ||| || | ||| || ||||| ||||| || ||||||||||||| || ||| | | || Sbjct 712832 CAGCACAAGATGGAGGGTGGATTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATC 712891 Query 16783 CTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC 16842 |||| || ||||| || | || |||| ||| || || || | ||| || ||||| Sbjct 712892 TTCCAGCTGCTTGCCAGCGAAGATCAGCCTCTGCTGATCGGGGGGAATGCCTTCCTTGTC 712951 Query 16843 --GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATG 16900 || ||||| |||||| | | | ||||| | |||||| || | ||||||| Sbjct 712952 CTGGATCTTTGC--CTTCACATTCTCAATGGTGTCACTGGGCTCGACCTCAAGGGTGATG 713009 Query 16901 GTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 || || ||||||| || || || || |||||||| Sbjct 713010 GTCTTGCCGGTCAAGGTCTTCACGAAGATCTGCAT 713044 Score = 86.0 bits (94), Expect = 5e-12 Identities = 149/215 (69%), Gaps = 4/215 (2%) Strand=Plus/Plus Query 16723 CAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTC 16782 ||| || | ||| || ||||| ||||| || ||||||||||| | || ||| | | || Sbjct 712604 CAGCACAAGATGGAGGGTGGATTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCATC 712663 Query 16783 CTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC 16842 |||| || ||||| || | || |||| ||| || || || | || || ||||| Sbjct 712664 TTCCAGCTGCTTGCCAGCGAAGATCAGCCTCTGCTGATCGGGGGGAATACCTTCCTTGTC 712723 Query 16843 --GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATG 16900 || || ||| ||||| | | | ||||| | |||||| || | ||||||| Sbjct 712724 CTGGATCTTCGCT--TTCACGTTCTCAATGGTGTCACTGGGCTCAACCTCGAGGGTGATG 712781 Query 16901 GTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 ||||| || ||||| || || ||||| |||||||| Sbjct 712782 GTTTTGCCAGTCAGGGTCTTCACAAAGATCTGCAT 712816 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 404952118673770