Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nannopterum_20auritus_20[genbank_20GCA_5F002173455.1_202017-06-06] 27,523 sequences; 1,246,050,644 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq1171 93.3 4e-14 seq44 84.2 2e-11 >seq1171 Length=398088 Score = 93.3 bits (102), Expect = 4e-14 Identities = 81/101 (80%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 123606 GAAACCGGAACGCCGTACATGCTCTACAAAGACGCCTGCAACAGGAAAACCAATCAGAGC 123665 || ||||| |||||||||||||| ||||||||| | |||||| |||| | ||||||| Sbjct 369025 GAGACCGGCACGCCGTACATGCTGTACAAAGACTCTTGCAACCGGAAGAGCAATCAGCAG 368966 Query 123666 AACTTGGGAACAATAAAATGTAGTAATCTTTGCTCCGAAAT 123706 |||||||| || || ||||| || ||||| || | ||||| Sbjct 368965 AACTTGGGGACCATCAAATGCAGCAATCTGTGTACAGAAAT 368925 >seq44 Length=2740361 Score = 84.2 bits (92), Expect = 2e-11 Identities = 147/214 (69%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 45128 CAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATC 45187 || ||| ||||| || || |||||||| ||||| || || || | ||| ||| Sbjct 713060 CAGCACAAGATGGAGGGTGGATTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCATC 713119 Query 45188 GTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATC 45247 |||| || || || ||| | |||| | ||||| || || ||||||||||| || || Sbjct 713120 TTCCAGCTGCTTGCCAGCGAAGATCAGCCTCTGCTGATCGGGGGGAATGCCTTCCTTGTC 713179 Query 45248 TTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGT 45307 || || ||| || | || | |||||| | |||||| ||||| || | || Sbjct 713180 CTGGATCTTTGCCTTCACATTCTCAATGGTGTCACTGGGCTCGACCTCGAGGGTGATGGT 713239 Query 45308 TTTGCCGGTTAGAGTTTTTACAAAAATTTGCATC 45341 |||||||| || || |||||||| || |||||| Sbjct 713240 CTTGCCGGTCAGGGTCTTTACAAAGATCTGCATC 713273 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 451847693949080