Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nannopterum_20auritus_20[genbank_20GCA_5F002173455.1_202017-06-06] 27,523 sequences; 1,246,050,644 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq406 91.5 6e-13 seq449 86.0 2e-11 seq608 84.2 9e-11 >seq406 Length=3112830 Score = 91.5 bits (100), Expect = 6e-13 Identities = 104/140 (74%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 451313 GTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACT 451372 |||||| |||| || | ||||| || || ||||||||||| | || || || || || Sbjct 2051320 GTTACTAATGCTGTCGTGACTGTACCAGCCTATTTCAATGACTCTCAGCGTCAGGCTACG 2051261 Query 451373 AAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCA 451432 |||||||| ||| ||||| || | || || || |||||||| || || || ||||| Sbjct 2051260 AAAGATGCTGGAACCATTGCAGGGCTCAACGTGCTGCGAATTATCAACGAGCCGACAGCT 2051201 Query 451433 GCTGCTCTAGCATATGGACT 451452 ||||| |||| ||||| || Sbjct 2051200 GCTGCCATAGCCTATGGTCT 2051181 >seq449 Length=3059481 Score = 86.0 bits (94), Expect = 2e-11 Identities = 108/148 (73%), Gaps = 3/148 (2%) Strand=Plus/Plus Query 451149 AAAAAGAGAAAAAATTCTTTTCTTATGATGTAGTAAATCAAAAAGGAAAGCCCTATATTC 451208 ||||||| | | || | ||||| | | || || | | |||| |||||| |||||| Sbjct 1175796 AAAAAGACAGTATATGTTGTTCTTCTCAGGTTGTTGAAAAGAAAGCCAAGCCCCATATTC 1175855 Query 451209 AAGTAAATTATAAAGGTGAA---ACTAAAACTTTTGCTCCTGAAGAAATTTCATCTATGG 451265 |||| || | ||||| | || ||||| |||||||||||||||||||| |||||| Sbjct 1175856 AAGTCGATGTTGGAGGTGGACAGACAAAAACATTTGCTCCTGAAGAAATTTCTGCTATGG 1175915 Query 451266 TTCTTACTAAAATGAAAGAAACAGCAGA 451293 | || || || ||||| || || ||||| Sbjct 1175916 TCCTGACAAAGATGAAGGAGACGGCAGA 1175943 >seq608 Length=2992917 Score = 84.2 bits (92), Expect = 9e-11 Identities = 166/244 (68%), Gaps = 14/244 (6%) Strand=Plus/Minus Query 451898 GAAATTGTGCTTGTAGGAGGTTCTACACGAATTCCTAAAATTCAAGATATGTT----GTC 451953 || || ||||| ||||| || ||||| || || || || || ||| | || | | | Sbjct 529665 GAGATCGTGCTGGTAGGTGGCTCTACCCGTATCCCCAAGATCCAAAAGCTGCTACAGGAC 529606 Query 451954 TTCTTATTTTGGAGGAAAACAACTATGTAAGAGCGTAAATCCTGATGAAGCTGTTGCATA 452013 ||||| | || ||| | || |||||| | ||||||||||| |||||||| || Sbjct 529605 TTCTTCAAT----GGCAAAGAGCTCAACAAGAGCATCAATCCTGATGAGGCTGTTGCTTA 529550 Query 452014 TGGTGCTGCAGTTCAAGCAGCTATTCTAACAGGTTCAGATGA---TGAAAAATTAGGAGA 452070 || ||||| || ||||||||||| || | || ||| | ||| || | || Sbjct 529549 CGGCGCTGCTGTGCAAGCAGCTATCCTCATGGG---AGACAAGTCTGAGAACGTGCAGGA 529493 Query 452071 TATTCTGTTAGTAGATGTAACACCTCTATCTCTTGGAGTTGAAACAGCTGGTGGAATGAT 452130 | | ||| | | ||||| || ||||| || || || | || ||||| |||||| |||| Sbjct 529492 TCTGCTGCTGTTGGATGTCACCCCTCTGTCCCTGGGCATCGAGACAGCCGGTGGAGTGAT 529433 Query 452131 GACT 452134 |||| Sbjct 529432 GACT 529429 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1975021685750484