Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nannopterum_20auritus_20[genbank_20GCA_5F002173455.1_202017-06-06] 27,523 sequences; 1,246,050,644 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq406 183 4e-41 >seq406 Length=3112830 Score = 183 bits (202), Expect = 4e-41 Identities = 368/543 (68%), Gaps = 6/543 (1%) Strand=Plus/Plus Query 7040 GCCCCGTATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAA 7099 || || || || || || ||||| ||||| || | || ||||| ||||| ||||| || Sbjct 2050515 GCACCATAAGCCACAGCTTCATCAGGGTTGATGCTCTTGTTCAGCTCTTTGCCGTTGAAG 2050574 Query 7100 TAATCCGATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATT 7159 | ||| | || | ||||| || ||||| || ||||| ||||| |||| || || Sbjct 2050575 AAGTCCTGCAGCAGCTTCTGAATCTTTGGGATACGAGTCGACCCACCAACCAGCACAATG 2050634 Query 7160 TCATTCACTTTCGATTTATCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCATA 7219 |||| | | ||||| |||| ||| | || || || | ||||| ||||| |||| Sbjct 2050635 TCATGGATCTGAGATTTGTCGAGCTTGGCATCCCGCAGGGCCTTTTCCACAGGATCCAGG 2050694 Query 7220 CATTTACGGAACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAG 7279 ||||||| ||| ||| || ||||| || || | ||||||||| || ||| Sbjct 2050695 GTGCCGCGGAACAGGTCGGCGTTCAGCTCTTCAAAGCGAGCTCTGGTAATGGACGTGTAG 2050754 Query 7280 AAATCAACGCCGTCGTATAACGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGATAAC 7339 || |||| || || || | || ||||||||||| | | || | | || || | Sbjct 2050755 AAGTCAATACCCTCATAGAGAGAGTCAATTTCAATACTGGCCTGCGTGCTAGATGACAGA 2050814 Query 7340 GTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAA 7399 || |||||||| ||||| || || || || | ||||| | || | | ||| | | Sbjct 2050815 GTACGCTTTGCACGCTCGCATGCGGTGCGGAGGCGACGGACTGCTCTCTTGTTCTCAGTG 2050874 Query 7400 ATATCTTTCTTATGTTTACGTTTAAACTCTTCAGAGAAGTG-TCGA--AGGAGTCTCGAA 7456 || |||||||| || || || || || || | |||||| | || | | | | Sbjct 2050875 ATGTCTTTCTTGTGCTTGCGCTTGAATTCAGCGATGAAGTGGTTGACCATGCGGTTG--- 2050931 Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 || || ||||| ||||||||||| || || || || || | ||| || |||||||| || Sbjct 2050932 TCAAAGTCTTCTCCACCCAAGTGAGTGTCACCTGCAGTGGATTTCACCTCAAAGATGCCA 2050991 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576 ||||||| | | | || |||||||| || ||||| || |||||||| || || ||| Sbjct 2050992 TCTTCAATAGTCAGAATTGACACATCAAAGGTGCCACCTCCAAGGTCAAAGATAAGAACG 2051051 Query 7577 TTC 7579 ||| Sbjct 2051052 TTC 2051054 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 634914290499320