Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nannopterum_20auritus_20[genbank_20GCA_5F002173455.1_202017-06-06] 27,523 sequences; 1,246,050,644 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq44 136 9e-27 seq20 122 2e-22 seq1007 93.3 9e-14 >seq44 Length=2740361 Score = 136 bits (150), Expect = 9e-27 Identities = 158/212 (75%), Gaps = 6/212 (3%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 ||||| || || ||||| || || || || |||||||| | || || | |||||||| Sbjct 712380 ACAAGATGGAGGGTGGATTCCTTCTGGATGTTGTAATCTGAGAGGGTACGACCATCTTCC 712439 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||| || |||||||| || | || || || || ||||||||||| ||||| || Sbjct 712440 AGCTGCTTGCCAGCGAAGATCAGCCTCTGCTGATCAGGGGGAATGCCTTCCTTGTCCTGG 712499 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACT---TTCCACTTCAAGGGTAACCGTC 195108 || ||| ||| || |||||||||||||| ||| || || |||||||| | ||| Sbjct 712500 ATCTTTGCCTTCACATTCTCAATGGTGTC---ACTGGGCTCGACCTCAAGGGTGATGGTC 712556 Query 195109 TTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || ||||| || || ||||| | ||||| Sbjct 712557 TTGCCGGTCAAGGTCTTCACGAAGATCTGCAT 712588 Score = 136 bits (150), Expect = 9e-27 Identities = 158/212 (75%), Gaps = 6/212 (3%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 ||||| || || ||||| || || || || ||||| |||| || || | |||||||| Sbjct 712836 ACAAGATGGAGGGTGGATTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCTTCC 712895 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||| || |||||||| || | || || || || ||||||||||| ||||| || Sbjct 712896 AGCTGCTTGCCAGCGAAGATCAGCCTCTGCTGATCGGGGGGAATGCCTTCCTTGTCCTGG 712955 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACT---TTCCACTTCAAGGGTAACCGTC 195108 || ||| ||| || |||||||||||||| ||| || || |||||||| | ||| Sbjct 712956 ATCTTTGCCTTCACATTCTCAATGGTGTC---ACTGGGCTCGACCTCAAGGGTGATGGTC 713012 Query 195109 TTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || ||||| || || ||||| | ||||| Sbjct 713013 TTGCCGGTCAAGGTCTTCACGAAGATCTGCAT 713044 Score = 122 bits (134), Expect = 2e-22 Identities = 155/212 (73%), Gaps = 6/212 (3%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 ||||| || || ||||| || || || || ||||| || | || || | |||||||| Sbjct 713064 ACAAGATGGAGGGTGGATTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCATCTTCC 713123 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||| || |||||||| || | || || || || ||||||||||| ||||| || Sbjct 713124 AGCTGCTTGCCAGCGAAGATCAGCCTCTGCTGATCGGGGGGAATGCCTTCCTTGTCCTGG 713183 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACT---TTCCACTTCAAGGGTAACCGTC 195108 || ||| ||| || |||||||||||||| ||| || || || ||||| | ||| Sbjct 713184 ATCTTTGCCTTCACATTCTCAATGGTGTC---ACTGGGCTCGACCTCGAGGGTGATGGTC 713240 Query 195109 TTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || |||| || ||||| || | ||||| Sbjct 713241 TTGCCGGTCAGGGTCTTTACAAAGATCTGCAT 713272 Score = 118 bits (130), Expect = 2e-21 Identities = 154/212 (73%), Gaps = 6/212 (3%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 ||||| || ||||| || || || || || ||||| |||| || || | |||||||| Sbjct 712152 ACAAGATGGAGAGTAGATTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCTTCC 712211 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||| || || ||||| || | || || || || ||||||||||| ||||| || Sbjct 712212 AGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCGGGGGGAATGCCTTCCTTGTCCTGG 712271 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACT---TTCCACTTCAAGGGTAACCGTC 195108 || ||| ||| || |||||||||||||| ||| || || || ||||| | ||| Sbjct 712272 ATCTTTGCCTTCACATTCTCAATGGTGTC---ACTGGGCTCGACCTCGAGGGTGATGGTC 712328 Query 195109 TTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || |||| || || || || | ||||| Sbjct 712329 TTACCGGTCAGGGTCTTCACAAAGATCTGCAT 712360 Score = 104 bits (114), Expect = 5e-17 Identities = 151/212 (71%), Gaps = 6/212 (3%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 ||||| || || ||||| || || || || ||||| || | || || | |||||||| Sbjct 712608 ACAAGATGGAGGGTGGATTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCATCTTCC 712667 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||| || |||||||| || | || || || || ||||| ||||| ||||| || Sbjct 712668 AGCTGCTTGCCAGCGAAGATCAGCCTCTGCTGATCGGGGGGAATACCTTCCTTGTCCTGG 712727 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACT---TTCCACTTCAAGGGTAACCGTC 195108 || || || ||||||||||||||||| ||| || || || ||||| | || Sbjct 712728 ATCTTCGCTTTCACGTTCTCAATGGTGTC---ACTGGGCTCAACCTCGAGGGTGATGGTT 712784 Query 195109 TTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || |||| || || || || | ||||| Sbjct 712785 TTGCCAGTCAGGGTCTTCACAAAGATCTGCAT 712816 >seq20 Length=4226088 Score = 122 bits (134), Expect = 2e-22 Identities = 156/214 (73%), Gaps = 6/214 (3%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || || || ||||||||||| || || || ||||| || | || || | ||| ||||| Sbjct 1306265 ACCAGATGCAGAGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCGTCTTCC 1306206 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||| || || ||||| || | || || || || ||||||||||| ||||| || Sbjct 1306205 AGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCAGGGGGAATGCCTTCCTTGTCCTGG 1306146 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACT---TTCCACTTCAAGGGTAACCGTC 195108 || || |||||| |||||||||||||| ||| || || || ||||| | ||| Sbjct 1306145 ATCTTGGCCTTGACATTCTCAATGGTGTC---ACTGGGCTCAACCTCCAGGGTGATGGTC 1306089 Query 195109 TTTCCTGTCAAAGTTTTTACGAACACTTGCATTT 195142 || || |||| || || || || | ||||||| Sbjct 1306088 TTGCCCGTCAGGGTCTTCACAAAGATCTGCATTT 1306055 Score = 118 bits (130), Expect = 2e-21 Identities = 154/212 (73%), Gaps = 6/212 (3%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || || || || |||||||| ||||| || ||||| |||| ||| || | ||| ||||| Sbjct 1306949 ACCAGATGCAGGGTGGACTCCTTTTGGATGTTGTAGTCGGAAAGGGTGCGCCCGTCTTCC 1306890 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||| || || ||||| | | || || || || |||||||| || ||||| || Sbjct 1306889 AGCTGCTTGCCAGCAAAGATCAACCTCTGCTGATCAGGCGGAATGCCCTCCTTGTCCTGG 1306830 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACT---TTCCACTTCAAGGGTAACCGTC 195108 || || |||||| |||||||||||||| ||| || || || ||||| | ||| Sbjct 1306829 ATCTTGGCCTTGACATTCTCAATGGTGTC---ACTGGGCTCAACCTCCAGGGTGATGGTC 1306773 Query 195109 TTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || |||| || || || || | ||||| Sbjct 1306772 TTGCCCGTCAGGGTCTTCACAAAGATCTGCAT 1306741 Score = 113 bits (124), Expect = 1e-19 Identities = 153/212 (72%), Gaps = 6/212 (3%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || || || || |||||||| || || || ||||| |||| ||| || | ||| ||||| Sbjct 1306493 ACCAGATGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAAAGGGTGCGCCCGTCTTCC 1306434 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||| || || ||||| | | || || || || |||||||| || ||||| || Sbjct 1306433 AGCTGCTTGCCAGCAAAGATCAACCTCTGCTGATCAGGCGGAATGCCCTCCTTGTCCTGG 1306374 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACT---TTCCACTTCAAGGGTAACCGTC 195108 || || |||||| |||||||||||||| ||| || || || ||||| | ||| Sbjct 1306373 ATCTTGGCCTTGACATTCTCAATGGTGTC---ACTGGGCTCAACCTCCAGGGTGATGGTC 1306317 Query 195109 TTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || |||| || || || || | ||||| Sbjct 1306316 TTGCCCGTCAGGGTCTTCACAAAGATCTGCAT 1306285 Score = 113 bits (124), Expect = 1e-19 Identities = 153/212 (72%), Gaps = 6/212 (3%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || || || || |||||||| || || || ||||| |||| ||| || | ||| ||||| Sbjct 1306721 ACCAGATGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAAAGGGTGCGCCCGTCTTCC 1306662 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||| || || ||||| | | || || || || |||||||| || ||||| || Sbjct 1306661 AGCTGCTTGCCAGCAAAGATCAACCTCTGCTGATCAGGCGGAATGCCCTCCTTGTCCTGG 1306602 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACT---TTCCACTTCAAGGGTAACCGTC 195108 || || |||||| |||||||||||||| ||| || || || ||||| | ||| Sbjct 1306601 ATCTTGGCCTTGACATTCTCAATGGTGTC---ACTGGGCTCAACCTCCAGGGTGATGGTC 1306545 Query 195109 TTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || |||| || || || || | ||||| Sbjct 1306544 TTGCCCGTCAGGGTCTTCACAAAGATCTGCAT 1306513 >seq1007 Length=8446676 Score = 93.3 bits (102), Expect = 9e-14 Identities = 74/89 (83%), Gaps = 0/89 (0%) Strand=Plus/Plus Query 194951 CTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCTGCGAAGA 195010 |||||||||||||||| |||| || || | |||||||| ||||||||||| || || | Sbjct 4019020 CTTTTTGAATATTGTAGTCGGACAGTGTGCGTCCATCTTCTAGCTGCTTACCAGCAAAAA 4019079 Query 195011 TAAGTCGTTGTTGGTCTGGAGGAATGCCT 195039 ||||||| || || || |||||||||||| Sbjct 4019080 TAAGTCGCTGCTGATCAGGAGGAATGCCT 4019108 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109090354142141