Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nannopterum_20auritus_20[genbank_20GCA_5F002173455.1_202017-06-06] 27,523 sequences; 1,246,050,644 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq377 132 9e-26 seq54 122 2e-22 seq1171 87.8 3e-12 >seq377 Length=3692098 Score = 132 bits (146), Expect = 9e-26 Identities = 148/198 (75%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 241430 AGTTGGGCCACCTGGTCCCGCAGAACGGACGCGGTATTGGACAGTCCTGCGTTGTCAGAC 241489 || |||| |||||| | || || | | ||||| || ||| | ||||| | | Sbjct 2757232 AGCTGGGAGACCTGGGCGCGGAGGAGGTTGGCGGTGGCGGCCAGCTCGGCGTTCTGCCCC 2757291 Query 241490 TTGAGCACCTTCACTTTCTCCTCCAGCCGCGCGATGCGTTCCAGTTTGCGCCGGCGGCAT 241549 |||||| ||||||| |||||||||||||| |||||||| ||||| || ||||||||||| Sbjct 2757292 TTGAGCGCCTTCACCTTCTCCTCCAGCCGGGCGATGCGCTCCAGCTTCCGCCGGCGGCAC 2757351 Query 241550 TTGGTGGCTGCCAAGCGGTTCCGGAGTCTCTTACGTTCCGCCTTGATGCGTTCCTGGTCC 241609 |||| ||| || | ||||||||| || | ||| || |||||||| | || |||||| | Sbjct 2757352 TTGGAGGCGGCGATGCGGTTCCGCAGCCGCTTGCGCTCCGCCTTCAGCCGCTCCTGGCTC 2757411 Query 241610 TCCATGTCGATCGGAGAC 241627 ||| ||| | ||| ||| Sbjct 2757412 TCCGCGTCCAGCGGCGAC 2757429 >seq54 Length=1427689 Score = 122 bits (134), Expect = 2e-22 Identities = 154/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 241415 AGGACCTCCTGTTTGAGTTGGGCCACCTGGTCCCGCAGAACGGACGCGGTATTGGACAGT 241474 ||||||| ||| ||||| ||||| ||||| || || || | | ||||| || ||| Sbjct 728046 AGGACCTTCTGCTTGAGCTGGGCGACCTGCTCGCGGAGCAGGCTGGCGGTGGAGGCCAGC 728105 Query 241475 CCTGCGTTGTCAGACTTGAGCACCTTCACTTTCTCCTCCAGCCGCGCGATGCGTTCCAGT 241534 | | ||| | |||||| |||||| ||||||||||| || | ||| || ||||| Sbjct 728106 TCCGTGTTCTGGCTCTTGAGGCTCTTCACCTTCTCCTCCAGGCGGGAGATCCGCTCCAGC 728165 Query 241535 TTGCGCCGGCGGCATTTGGTGGCTGCCAAGCGGTTCCGGAGTCTCTTACGTTCCGCCTTG 241594 || | | |||||| |||| ||| || | ||| |||| || | ||| |||||||||||| Sbjct 728166 TTCCTCTTGCGGCACTTGGAGGCGGCGATGCGATTCCTCAGCCGCTTTCGTTCCGCCTTG 728225 Query 241595 ATGCGTTCCTGGTCCTCCATGTCGATCGGAGA 241626 || || ||||| ||||||||||| || || Sbjct 728226 ATACGCTCCTGCGTGTCCATGTCGATGGGGGA 728257 >seq1171 Length=398088 Score = 87.8 bits (96), Expect = 3e-12 Identities = 110/151 (73%), Gaps = 0/151 (0%) Strand=Plus/Plus Query 213813 ACTCTCTGCATGAACAGGTCCGGGACCCACAGCGCGGTGAACAGGTCCCTGGTCCTCCTC 213872 |||| || |||||| ||||| || | ||| || || ||| ||||| |||| | | | Sbjct 370247 ACTCGCTTCATGAAGAGGTCAGGAATCCAGAGGGCAAAGAAGAGGTCTCTGGCTCGCTGC 370306 Query 213873 TCGTCCACTCCAGAGTTTTTGCGCAGATCTAGAAAGTCAAAGATGTCCGCGTGCCACGGC 213932 || || ||||| ||| || | || ||||| |||||||||||| ||||| ||| Sbjct 370307 TCTTCTTTTCCAGTGTTCTTCTTTAAGTCAAGAAACTCAAAGATGTCCAAATGCCATGGC 370366 Query 213933 TCCATGTAGATGGCAAAGGCGCCCGGCCTCT 213963 |||| |||||||||||| || || || |||| Sbjct 370367 TCCAGGTAGATGGCAAAAGCCCCGGGTCTCT 370397 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931212317784320