Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nannopterum_20auritus_20[genbank_20GCA_5F002173455.1_202017-06-06] 27,523 sequences; 1,246,050,644 total letters Query= NC_020474.2 Length=180421 Score E Sequences producing significant alignments: (Bits) Value seq68 255 7e-63 seq707 140 4e-28 >seq68 Length=3481568 Score = 255 bits (282), Expect = 7e-63 Identities = 654/990 (66%), Gaps = 7/990 (1%) Strand=Plus/Minus Query 160045 TGTGTCGCAGATGTTCGTCCAGACATTGGACGGCGAACACGTCAACGTCTTCGTCGAATT 160104 |||||||||||| || |||| ||||| || || || |||||| || ||| || | Sbjct 2574589 TGTGTCGCAGATACTCTTCCAAACATTTCACTGCAAAAGGGTCAACATCAGTGTCAAACT 2574530 Query 160105 TATTTGCGAACAGATGGTGAGCGTTCTGTAGGATCCAGTGCACGTCTCCGGACCCGAACA 160164 |||| || || | ||||| ||| |||| ||||||| || |||||| ||| || | Sbjct 2574529 TATTAGCAAAGAAGTGGTG---GTTTCGTAGCATCCAGTTCAGGTCTCCTACCCCAAAAA 2574473 Query 160165 CGCAGACGGAACGTATGTGCACGCCGTTGCAAGGCGGGTACAGAGCTCCTTTCGCCACGT 160224 | ||||| || || | || || || |||| || ||||| | || || || | ||||| Sbjct 2574472 CACAGACAGAGCGAACATGAACCCCACTGCATGGTGGGTAAGGTGCACCCTTGGACACGT 2574413 Query 160225 CACCTTCGTAGTACTGCCACTTCACAAACCTGGCTATCGCCTGCATGTCGGAGGTGTCGT 160284 ||||||| ||||||||||||| ||||||||||| | || | |||||| || || | Sbjct 2574412 CACCTTCAAAGTACTGCCACTTGACAAACCTGGCCAGTGCATTCATGTCAGAAACATCAT 2574353 Query 160285 ATTTGTACATCAGGGGA-ACGGCACCGGGAACGCCGGGCATACGCTGTAGGGTGGCCCAC 160343 | |||| || || || || ||||| || || | || || | ||| | || ||||| Sbjct 2574352 ACTTGT-CACTAGAAGACACTGCACCTGGGACTTCAGGGATTCTCTGAATTGTTGCCCAT 2574294 Query 160344 AGGTGTTCGTCGGGGCTGTACGTGTCCTTAGACCATTCCATGAACTCTCCGATTAACCTG 160403 | || ||| || |||||||| || || || | ||| || || |||| | ||| ||| Sbjct 2574293 AAGTATTCATCTGGGCTGTAAGTATCTTTTGCCCACTCAATTAACTTAACTATTTTGCTG 2574234 Query 160404 TCCCGCAGAACGTGAGTAACGTAGGATCTGGTCACGACAAAGTACGCGCTGCCGGAGAAT 160463 | | |||| || | |||| | || ||||| || || || || || || Sbjct 2574233 CTTTGTAATACGTATTCTACAAATCTTCTGCTAACTACAAAATAGGCACTACCAGAAAAA 2574174 Query 160464 ATCGGTATGGGTATAGGCGGCGTGTCTTTGTCCTGACCGGTGTTAGACACCACTCCTTTC 160523 || || | | ||| || | |||||| || ||||| | || | Sbjct 2574173 ATTGGAGTACTGAGAGGTGGTAGCTGTTTGTCTATGCCTGTGTTTTTTATTTTACCATCA 2574114 Query 160524 ACCAGCGCGTGTCGCTTCTTCCACCTGACCATCTTGTGCGGTGGCATGCGTTCCGTCTCT 160583 | | | | || | || |||||||| || || | ||||| |||||| || Sbjct 2574113 ATAATCTCATGGTGTTTTTTCCACCTTACTTCTTTATAAACAGGCATTTTTTCCGTTTCC 2574054 Query 160584 AGACTGTTGGCACCGTCGAGCGATTTCAGCTGCTTGACGATCTCTAGGTTCGTCTTGAGC 160643 | ||||| |||| | || | ||| | | || || || || |||| ||||| | Sbjct 2574053 AAGCTGTTTTCACCTTTAAGGGCTTTTAATTTCTCTACTATTTCCTGGTTGGTCTTTATA 2573994 Query 160644 GGAAAGTCGGTACCGCACAAGTTTATCACGTACTTCCATTTCGCGCTCAGGTCGTGCAGG 160703 |||||||| | || || | |||||||| ||| ||||| || | || ||| || Sbjct 2573993 GGAAAGTCCATGCCACAGAGGTTTATCAGGTATTTCCAGTTTGAACTTCTTCTGTGGAGA 2573934 Query 160704 TCCCTCATGCAATTAATATCTGCCTGCACGCGGCTCCAGGAAGCGTACACTACGTTCTCT 160763 || ||||||| ||||| ||||||||||| |||||||||||||| || || || ||||| Sbjct 2573933 TCTTTCATGCAGTTAATGTCTGCCTGCACCCGGCTCCAGGAAGCATATACAACACTCTCT 2573874 Query 160764 AGTTTACTGGCCACAAAGACGTTATCGAAACACGACACGATTCCCACCACCGCCAGAAAG 160823 | | |||| | |||||| ||||| ||||| || || |||||| ||| | ||| || Sbjct 2573873 AACTGGCTGGAAATAAAGACATTATCAAAACATGAGACTATTCCCTTCACAG-CAGCAAA 2573815 Query 160824 AACATCTTAT-CCGCCTTTCGGTCCACGTGCACGCAATACAGGTTCTGAGGCGCGTAGAT 160882 || | || | | |||| ||| || || | ||| || | |||||||| || ||||| Sbjct 2573814 AAAAGATTCTGGAGACTTTTTGTCAACATGAATGCAGTAAAAATTCTGAGGGGCATAGAT 2573755 Query 160883 GGCCCTGAGCAACCTCTCGAACATCTCTATCTTATGATGGATCACGATAGAGTAGGCTAT 160942 | || || | || || | |||||| || || |||| | ||| || || || || || Sbjct 2573754 TGATCTTAGAAGTCTATCAAGCATCTCAATTTTGTGATAAACCACTATGGAATAAGCAAT 2573695 Query 160943 CGGAAACTCGGTCTCCTCGCGACTCAGGGACCCGGTCAGGTACTTTCGCGTCTTGATAAA 161002 ||||| || | || || || || | | | | | ||| |||| |||||| | || Sbjct 2573694 TGGAAATTCTGCTTCTTCATTGCTGAGAGGCTCCATAATGTATTTTCTGGTCTTGGTGAA 2573635 Query 161003 ATAATCACAATCCCGCGTCATGTTGATATA 161032 | |||| || |||||||| ||||| Sbjct 2573634 GGAGGCACAGTCTGCTGTCATGTTAATATA 2573605 >seq707 Length=2308111 Score = 140 bits (154), Expect = 4e-28 Identities = 239/346 (69%), Gaps = 3/346 (1%) Strand=Plus/Minus Query 160044 CTGTGTCGCAGATGTTCGTCCAGACATTGGACGGCGAACACGTCAACGTCTTCGTCGAAT 160103 ||||| ||||| | || ||||| || ||| |||| |||| || | |||||| Sbjct 256762 CTGTGGCGCAGGTACTCCTCCAGGCACAGGATGGCGGCGTCGTCCACCACGGGGTCGAAC 256703 Query 160104 TTATTTGCGAACAGATGGTGAGCGTTCTGTAGGATCCAGTGCACGTCTCCGGACCCGAAC 160163 || || || || || ||||| | ||| || |||||| ||||||| || |||| | Sbjct 256702 TTGTTGGCCAAGAGGTGGTGC---TGCTGGAGCATCCAGGGCACGTCGCCCACCCCGTAG 256646 Query 160164 ACGCAGACGGAACGTATGTGCACGCCGTTGCAAGGCGGGTACAGAGCTCCTTTCGCCACG 160223 | ||||||||| || |||| |||| |||| |||||||| | || || || | Sbjct 256645 ATGCAGACGGAGCGCTGGTGCTGGCCGGTGCAGGGCGGGTAGGGCGCGCCCTTGCTGGGG 256586 Query 160224 TCACCTTCGTAGTACTGCCACTTCACAAACCTGGCTATCGCCTGCATGTCGGAGGTGTCG 160283 || || || |||||||||||| || | | || || || | ||| || ||| | | Sbjct 256585 TCGCCCTCCAGGTACTGCCACTTGACCAGGCGGGGTAGGGCGTTCATATCCGAGAGCTGG 256526 Query 160284 TATTTGTACATCAGGGGAACGGCACCGGGAACGCCGGGCATACGCTGTAGGGTGGCCCAC 160343 | |||| || |||| | || || || ||||| ||||| || | ||||||||||| Sbjct 256525 AACTTGTCATTCTGGGGCAGGGAGCCTGGCACGCCAGGCATGCGGTTGAGGGTGGCCCAG 256466 Query 160344 AGGTGTTCGTCGGGGCTGTACGTGTCCTTAGACCATTCCATGAACT 160389 | ||| ||||| |||||||| |||||||| | ||| || | ||||| Sbjct 256465 ATGTGCTCGTCAGGGCTGTAGGTGTCCTTGGCCCACTCAAAGAACT 256420 Score = 116 bits (128), Expect = 4e-21 Identities = 242/358 (68%), Gaps = 12/358 (3%) Strand=Plus/Minus Query 160618 TGACGATCTCTAGGTTCGTCTTGAGCGGAAAGTCGGTACCGCACAAGTTTATCACGTACT 160677 |||| ||||| ||| ||||||| || || ||||| ||||| ||| | | || | Sbjct 256194 TGACTATCTCAGCGTTGGTCTTGATGGGGAAATCGGTGCCGCAGGTGTTGAGGAGATAGT 256135 Query 160678 TCCATTTC---GCGCTCAGGTCGTGCAGGTCCCTCATGCAATTAATATCTGCCTGCACGC 160734 |||| | | |||| | ||||||| |||||| || | |||||||||| | Sbjct 256134 GCCATGGCATGGGGCTCTGCAA---CAGGTCCTGCATGCAGTTGAGGTCTGCCTGCAGCC 256078 Query 160735 GGCTCCAGGAAGCGTACACTACGTTCTCTAGTTTACTGGCCACAAAGACGTTATCGAAAC 160794 || |||||| || || || || || || || || |||||||||| || ||| | Sbjct 256077 GGGACCAGGAGGCATAGACCACCTTTTCCAGGCGGCTAGCCACAAAGATATTGGGGAAGC 256018 Query 160795 ACGACACGATTCCCACCACCGCCAGAAAGAACATCTTATCCGC---CTTTCGGTCCACGT 160851 | | ||||| || ||| ||| ||| || | ||| ||| | ||| |||| Sbjct 256017 AGGCTACGATGGCCCGCACGGCCTCCTGGAAGAT---AGCCGGGGACTTCCTGTCAACGT 255961 Query 160852 GCACGCAATACAGGTTCTGAGGCGCGTAGATGGCCCTGAGCAACCTCTCGAACATCTCTA 160911 | | ||| || | |||||| || | ||||| || ||| || | || |||||||||||| | Sbjct 255960 GGATGCAGTAGACGTTCTGGGGGGTGTAGAGGGACCTCAGGAGCCGCTCGAACATCTCGA 255901 Query 160912 TCTTATGATGGATCACGATAGAGTAGGCTATCGGAAACTCGGTCTCCTCGCGACTCAG 160969 | || | ||||| || || |||||||| || || ||||| | |||||| | ||||| Sbjct 255900 TGTTGTTGTGGATGACCATGGAGTAGGCAATGGGGAACTCTGCCTCCTCCTGGCTCAG 255843 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 577020614949480