Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nannopterum_20auritus_20[genbank_20GCA_5F002173455.1_202017-06-06] 27,523 sequences; 1,246,050,644 total letters Query= NC_026141.2 Length=4988 Score E Sequences producing significant alignments: (Bits) Value seq128 123 8e-25 seq754 114 4e-22 seq1503 113 1e-21 seq556 113 1e-21 seq40 113 1e-21 seq771 98.7 3e-17 seq225 98.7 3e-17 seq20 98.7 3e-17 seq515 95.1 4e-16 seq629 91.5 5e-15 seq2014 82.4 2e-12 seq1011 82.4 2e-12 >seq128 Length=1055785 Score = 123 bits (136), Expect = 8e-25 Identities = 71/73 (97%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 2768 GGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAAC 2827 |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 665392 GGCTGAAGTAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCAAA 665451 Query 2828 CCCGGGCTTCAGC 2840 ||||||||||||| Sbjct 665452 CCCGGGCTTCAGC 665464 Score = 123 bits (136), Expect = 8e-25 Identities = 71/73 (97%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 2768 GGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAAC 2827 |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 677162 GGCTGAAGTAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCAAA 677103 Query 2828 CCCGGGCTTCAGC 2840 ||||||||||||| Sbjct 677102 CCCGGGCTTCAGC 677090 >seq754 Length=1604945 Score = 114 bits (126), Expect = 4e-22 Identities = 69/73 (95%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 2768 GGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAAC 2827 ||||| |||||||||| ||||||||| |||||||||||||||||||||||||||||||| Sbjct 1424216 GGCTGGAGTAGCTCAGCTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCAAT 1424157 Query 2828 CCCGGGCTTCAGC 2840 ||||||||||||| Sbjct 1424156 CCCGGGCTTCAGC 1424144 >seq1503 Length=184747 Score = 113 bits (124), Expect = 1e-21 Identities = 68/72 (94%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 |||| |||||||||| ||||||||| |||||||||||||||||||||||||||||||| | Sbjct 131048 GCTGGAGTAGCTCAGCTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCAATC 130989 Query 2829 CCGGGCTTCAGC 2840 |||||||||||| Sbjct 130988 CCGGGCTTCAGC 130977 >seq556 Length=3465748 Score = 113 bits (124), Expect = 1e-21 Identities = 68/72 (94%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 |||| |||||||||| ||||||||| |||||||||||||||||||||||||||||||| | Sbjct 1401389 GCTGGAGTAGCTCAGCTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCAATC 1401330 Query 2829 CCGGGCTTCAGC 2840 |||||||||||| Sbjct 1401329 CCGGGCTTCAGC 1401318 Score = 113 bits (124), Expect = 1e-21 Identities = 68/72 (94%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 |||| |||||||||| ||||||||| |||||||||||||||||||||||||||||||| | Sbjct 1407617 GCTGGAGTAGCTCAGCTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCAATC 1407558 Query 2829 CCGGGCTTCAGC 2840 |||||||||||| Sbjct 1407557 CCGGGCTTCAGC 1407546 Score = 113 bits (124), Expect = 1e-21 Identities = 68/72 (94%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 |||| |||||||||| ||||||||| |||||||||||||||||||||||||||||||| | Sbjct 1408675 GCTGGAGTAGCTCAGCTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCAATC 1408616 Query 2829 CCGGGCTTCAGC 2840 |||||||||||| Sbjct 1408615 CCGGGCTTCAGC 1408604 Score = 105 bits (116), Expect = 2e-19 Identities = 68/73 (93%), Gaps = 1/73 (1%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAA-GGTCCCTGGTTCAAC 2827 |||| |||||||||| ||||||||| |||||||||||||||||| |||||||||||||| Sbjct 1401869 GCTGGAGTAGCTCAGCTGGGAGAGCGTTAGACTGAAGATCTAAAGGGTCCCTGGTTCAAT 1401810 Query 2828 CCCGGGCTTCAGC 2840 ||||||||||||| Sbjct 1401809 CCCGGGCTTCAGC 1401797 >seq40 Length=802869 Score = 113 bits (124), Expect = 1e-21 Identities = 71/77 (92%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 2764 TTATGGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTT 2823 ||| ||||| |||||||||| ||||||||| ||||||||||||||||||||||||||||| Sbjct 468163 TTAGGGCTGGAGTAGCTCAGCTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTT 468222 Query 2824 CAACCCCGGGCTTCAGC 2840 ||| ||| ||||||||| Sbjct 468223 CAATCCCAGGCTTCAGC 468239 >seq771 Length=474774 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 40501 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 40442 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 40441 CCGGGTTTCGGC 40430 >seq225 Length=6104707 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 3772869 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 3772928 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 3772929 CCGGGTTTCGGC 3772940 >seq20 Length=4226088 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 1301518 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 1301577 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 1301578 CCGGGTTTCGGC 1301589 >seq515 Length=4839838 Score = 95.1 bits (104), Expect = 4e-16 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| ||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 4799851 GCCGAAATAGCTCAGTTGGGAGAGTGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 4799910 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 4799911 CCGGGTTTCGGC 4799922 >seq629 Length=282545 Score = 91.5 bits (100), Expect = 5e-15 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 2768 GGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAAC 2827 ||||| |||||||||| ||||||| |||||||||||||||||| ||||| || |||| | Sbjct 30426 GGCTGGAGTAGCTCAGCCGGGAGAGGATTAGACTGAAGATCTAACGGTCCTTGCTTCAGC 30485 Query 2828 CCCGGGCTTCAGC 2840 ||||| ||||||| Sbjct 30486 CCCGGCCTTCAGC 30498 >seq2014 Length=9359 Score = 82.4 bits (90), Expect = 2e-12 Identities = 62/73 (85%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 2768 GGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAAC 2827 ||||| ||||||||| ||||| | |||||| ||||||||| ||||||||| |||| | Sbjct 6728 GGCTGGGGTAGCTCAGCCGGGAGGGGGTTAGACCGAAGATCTAGAGGTCCCTGCTTCAGC 6669 Query 2828 CCCGGGCTTCAGC 2840 ||||||||||||| Sbjct 6668 CCCGGGCTTCAGC 6656 >seq1011 Length=187918 Score = 82.4 bits (90), Expect = 2e-12 Identities = 62/73 (85%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 2768 GGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAAC 2827 ||||| ||||||||| ||||| | |||||||||||||||| |||||||| |||| | Sbjct 4789 GGCTGGGGTAGCTCAGCCGGGAGGGGGTTAGACTGAAGATCTAGCGGTCCCTGCTTCAGC 4848 Query 2828 CCCGGGCTTCAGC 2840 ||||||||||||| Sbjct 4849 CCCGGGCTTCAGC 4861 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15844828750335