Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nannopterum_20auritus_20[genbank_20GCA_5F002173455.1_202017-06-06] 27,523 sequences; 1,246,050,644 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq794 197 2e-44 seq912 161 1e-33 seq303 149 9e-30 seq307 118 2e-20 seq490 98.7 1e-14 seq17078 89.7 7e-12 seq1265 89.7 7e-12 >seq794 Length=752778 Score = 197 bits (218), Expect = 2e-44 Identities = 182/229 (79%), Gaps = 6/229 (3%) Strand=Plus/Minus Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973 ||||||||||| ||||||||||||||| || || |||| || |||| ||||| Sbjct 609030 TACAAGGTGCTGAAGCAGGTGCACCCCGACAC-----GGGCATC-TCGTCCAAGGCCATG 608977 Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033 ||||||||||| || || |||||||| |||| ||||||| | ||||||| |||| Sbjct 608976 GGCATCATGAACTCCTTCGTGAACGACATCTTCGAGCGCATCGCCGGCGAGGCCTCTCGC 608917 Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093 ||||||| || |||||||||| ||| ||| | |||| ||||||||||| |||||||| Sbjct 608916 CTGGCGCACTACAACAAGCGCTCCACCATCACCTCGCGGGAGATCCAGACGGCCGTGCGG 608857 Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 || | ||| |||||| ||||||| ||||||||||||||||||||||| Sbjct 608856 CTCCTGCTGCCCGGCGAGCTGGCCAAGCACGCCGTCTCCGAGGGCACCA 608808 Score = 197 bits (218), Expect = 2e-44 Identities = 182/229 (79%), Gaps = 6/229 (3%) Strand=Plus/Plus Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973 ||||||||||| ||||||||||||||| || || |||| || |||| ||||| Sbjct 647420 TACAAGGTGCTGAAGCAGGTGCACCCCGACAC-----GGGCATC-TCGTCCAAGGCCATG 647473 Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033 ||||||||||| || || |||||||| |||| ||||||| | ||||||| |||| Sbjct 647474 AGCATCATGAACTCCTTCGTGAACGACATCTTCGAGCGCATCGCCGGCGAGGCCTCTCGC 647533 Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093 ||||||| || |||||||||| ||| ||| | |||| ||||||||||| |||||||| Sbjct 647534 CTGGCGCACTACAACAAGCGCTCCACCATCACCTCGCGGGAGATCCAGACGGCCGTGCGG 647593 Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 || | ||| |||||| ||||||| ||||||||||||||||||||||| Sbjct 647594 CTCCTGCTGCCCGGCGAGCTGGCCAAGCACGCCGTCTCCGAGGGCACCA 647642 Score = 197 bits (218), Expect = 2e-44 Identities = 182/229 (79%), Gaps = 6/229 (3%) Strand=Plus/Plus Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973 ||||||||||| ||||||||||||||| || || |||| || |||| ||||| Sbjct 654349 TACAAGGTGCTGAAGCAGGTGCACCCCGACAC-----GGGCATC-TCGTCCAAGGCCATG 654402 Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033 ||||||||||| || || |||||||| |||| ||||||| | ||||||| |||| Sbjct 654403 GGCATCATGAACTCCTTCGTGAACGACATCTTCGAGCGCATCGCCGGCGAGGCCTCTCGC 654462 Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093 ||||||| || |||||||||| ||| ||| | |||| ||||||||||| |||||||| Sbjct 654463 CTGGCGCACTACAACAAGCGCTCCACCATCACCTCGCGGGAGATCCAGACGGCCGTGCGG 654522 Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 || | ||| |||||| ||||||| ||||||||||||||||||||||| Sbjct 654523 CTCCTGCTGCCCGGCGAGCTGGCCAAGCACGCCGTCTCCGAGGGCACCA 654571 Score = 197 bits (218), Expect = 2e-44 Identities = 182/229 (79%), Gaps = 6/229 (3%) Strand=Plus/Plus Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973 ||||||||||| ||||||||||||||| || || |||| || |||| ||||| Sbjct 717239 TACAAGGTGCTGAAGCAGGTGCACCCCGACAC-----GGGCATC-TCGTCCAAGGCCATG 717292 Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033 ||||||||||| || || |||||||| |||| ||||||| | ||||||| |||| Sbjct 717293 GGCATCATGAACTCCTTCGTGAACGACATCTTCGAGCGCATCGCCGGCGAGGCCTCTCGC 717352 Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093 ||||||| || |||||||||| ||| ||| | |||| ||||||||||| |||||||| Sbjct 717353 CTGGCGCACTACAACAAGCGCTCCACCATCACCTCGCGGGAGATCCAGACGGCCGTGCGG 717412 Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 || | ||| |||||| ||||||| ||||||||||||||||||||||| Sbjct 717413 CTCCTGCTGCCCGGCGAGCTGGCCAAGCACGCCGTCTCCGAGGGCACCA 717461 Score = 197 bits (218), Expect = 2e-44 Identities = 182/229 (79%), Gaps = 6/229 (3%) Strand=Plus/Plus Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973 ||||||||||| ||||||||||||||| || || |||| || |||| ||||| Sbjct 727235 TACAAGGTGCTGAAGCAGGTGCACCCCGACAC-----GGGCATC-TCGTCCAAGGCCATG 727288 Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033 ||||||||||| || || |||||||| |||| ||||||| | ||||||| |||| Sbjct 727289 GGCATCATGAACTCCTTCGTGAACGACATCTTCGAGCGCATCGCCGGCGAGGCCTCTCGC 727348 Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093 ||||||| || |||||||||| ||| ||| | |||| ||||||||||| |||||||| Sbjct 727349 CTGGCGCACTACAACAAGCGCTCCACCATCACCTCGCGGGAGATCCAGACGGCCGTGCGG 727408 Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 || | ||| |||||| ||||||| ||||||||||||||||||||||| Sbjct 727409 CTCCTGCTGCCCGGCGAGCTGGCCAAGCACGCCGTCTCCGAGGGCACCA 727457 Score = 197 bits (218), Expect = 2e-44 Identities = 182/229 (79%), Gaps = 6/229 (3%) Strand=Plus/Minus Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973 ||||||||||| ||||||||||||||| || || |||| || |||| ||||| Sbjct 728713 TACAAGGTGCTGAAGCAGGTGCACCCCGACAC-----GGGCATC-TCGTCCAAGGCCATG 728660 Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033 ||||||||||| || || |||||||| |||| ||||||| | ||||||| |||| Sbjct 728659 GGCATCATGAACTCCTTCGTGAACGACATCTTCGAGCGCATCGCCGGCGAGGCCTCTCGC 728600 Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093 ||||||| || |||||||||| ||| ||| | |||| ||||||||||| |||||||| Sbjct 728599 CTGGCGCACTACAACAAGCGCTCCACCATCACCTCGCGGGAGATCCAGACGGCCGTGCGG 728540 Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 || | ||| |||||| ||||||| ||||||||||||||||||||||| Sbjct 728539 CTCCTGCTGCCCGGCGAGCTGGCCAAGCACGCCGTCTCCGAGGGCACCA 728491 Score = 194 bits (214), Expect = 2e-43 Identities = 181/229 (79%), Gaps = 6/229 (3%) Strand=Plus/Plus Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973 ||||||||||| ||||||||||||||| || || |||| || |||| ||||| Sbjct 746298 TACAAGGTGCTGAAGCAGGTGCACCCCGACAC-----GGGCATC-TCGTCCAAGGCCATG 746351 Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033 ||||||||||| || || |||||||| |||| ||||||| | ||||||| |||| Sbjct 746352 GGCATCATGAACTCCTTCGTGAACGACATCTTCGAGCGCATCGCCGGCGAGGCCTCTCGC 746411 Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093 ||||||| || |||||||||| ||| ||| | |||| ||||||||||| |||||||| Sbjct 746412 CTGGCGCACTACAACAAGCGCTCCACCATCACCTCGCGGGAGATCCAGACGGCCGTGCGG 746471 Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 || | ||| |||||| ||||||| ||||||||| ||||||||||||| Sbjct 746472 CTCCTGCTGCCCGGCGAGCTGGCCAAGCACGCCGTGTCCGAGGGCACCA 746520 Score = 168 bits (186), Expect = 1e-35 Identities = 184/245 (75%), Gaps = 22/245 (9%) Strand=Plus/Plus Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973 ||||||||||| ||||||||||||||| || || |||| || |||| ||||| Sbjct 630346 TACAAGGTGCTGAAGCAGGTGCACCCCGACAC-----GGGCATC-TCGTCCAAGGCCATG 630399 Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCG----------GCAC--- 725020 ||||||||||| || || |||||||| |||| ||||||| ||| Sbjct 630400 GGCATCATGAACTCCTTCGTGAACGACATCTTCGAGCGCATCGCCGGNTGAGCGCATTGC 630459 Query 725021 ---CGAGGCCGGTCGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGAT 725077 ||||||| ||||||||||| || |||||||||| ||| ||| | |||| ||||| Sbjct 630460 CGGCGAGGCCTCTCGCCTGGCGCACTACAACAAGCGCTCCACCATCACCTCGCGGGAGAT 630519 Query 725078 CCAGACCGCCGTGCGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGG 725137 |||||| |||||||| || | ||| |||||| ||||||| |||||||||||||||||| Sbjct 630520 CCAGACGGCCGTGCGGCTCCTGCTGCCCGGCGAGCTGGCCAAGCACGCCGTCTCCGAGGG 630579 Query 725138 CACCA 725142 ||||| Sbjct 630580 CACCA 630584 >seq912 Length=28063 Score = 161 bits (178), Expect = 1e-33 Identities = 174/229 (76%), Gaps = 6/229 (3%) Strand=Plus/Minus Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973 |||||||| || ||||| ||||||||| |||| |||| ||| |||| ||||| Sbjct 13816 TACAAGGTACTGAAGCAAGTGCACCCCGACACCGG-----CATC-TCCTCCAAGGCCATG 13763 Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033 |||||||| || || ||||||||||| |||| ||||||| ||||| ||| Sbjct 13762 GGCATCATGAATTCCTTCGTCAACGACATCTTCGAGCGCATCGCGGGGGAGGCTTCGCGC 13703 Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093 ||||| | || |||||||||| ||| ||| | |||| ||||||||||| |||||| | Sbjct 13702 CTGGCTCACTACAACAAGCGCTCCACCATCACCTCGCGGGAGATCCAGACGGCCGTGAGG 13643 Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 || | ||| |||||| ||||||| |||||||||||||||||| |||| Sbjct 13642 CTCCTGCTGCCCGGCGAGCTGGCCAAGCACGCCGTCTCCGAGGGTACCA 13594 >seq303 Length=4456492 Score = 149 bits (164), Expect = 9e-30 Identities = 180/244 (74%), Gaps = 6/244 (2%) Strand=Plus/Plus Query 724899 TACTCGTCCTTTATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCC 724958 ||||| || | ||||||||||||| |||||||| |||||| |||| |||| Sbjct 174604 TACTCCATCTATGTCTACAAGGTGCTAAAGCAGGTCCACCCCGACACCGG-----CATC- 174657 Query 724959 TCCAACAAGTCCATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGC 725018 ||| |||| ||||| ||||||||||| |||||||| ||||| | || ||||||| Sbjct 174658 TCCTCCAAGGCCATGGGCATCATGAACTCCTTTGTCAATGACATCTTTGAGCGCATCGCT 174717 Query 725019 ACCGAGGCCGGTCGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATC 725078 || ||| |||||||| | | ||||||||| ||| ||| | | || ||||| Sbjct 174718 GGAGAAGCCTCCCGCCTGGCCCATTACAACAAGCGATCCACCATCACCTCCCGGGAGATT 174777 Query 725079 CAGACCGCCGTGCGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGC 725138 ||||| |||||||||||| | | | || || ||||||| |||||| ||||| |||||| Sbjct 174778 CAGACAGCCGTGCGCCTGCTGCTCCCAGGAGAGCTGGCCAAGCACGCTGTCTCGGAGGGC 174837 Query 725139 ACCA 725142 |||| Sbjct 174838 ACCA 174841 >seq307 Length=1381586 Score = 118 bits (130), Expect = 2e-20 Identities = 133/178 (75%), Gaps = 0/178 (0%) Strand=Plus/Plus Query 724965 AAGTCCATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAG 725024 ||| ||||| ||||||||||| || ||||| ||||| |||| || | | | | ||| Sbjct 166108 AAGGCCATGAGCATCATGAACTCCTTCGTCAATGACATCTTCGAGCGGCTGGCCTCGGAG 166167 Query 725025 GCCGGTCGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACC 725084 ||| |||||||| | | |||| | ||| ||| ||| || |||||| | ||||| Sbjct 166168 GCCTCGCGCCTGGCCCAGTACAACCACCGCTCCACCATCACCAGCCGCGAGGTGCAGACG 166227 Query 725085 GCCGTGCGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 |||||| | || | ||| |||||| ||||||| |||||| |||||||||||||||| Sbjct 166228 GCCGTGAGGCTCCTGCTGCCCGGCGAGCTGGCCAAGCACGCTGTCTCCGAGGGCACCA 166285 >seq490 Length=1639929 Score = 98.7 bits (108), Expect = 1e-14 Identities = 91/114 (80%), Gaps = 1/114 (1%) Strand=Plus/Minus Query 1455716 GAGCCGCTGCTGCGCGATAACCCGAACCGCTTTGTCCTGTTCCCCATCCGCTACCAGCGG 1455775 ||||||||| |||| || ||||| |||||| ||| | |||||||||| ||||| Sbjct 133551 GAGCCGCTGTTGCGGGACAACCCCCGCCGCTTCGTCATCTTCCCCATCCAGTACCACGAC 133492 Query 1455776 ATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGT 1455829 || ||| | |||||| || ||||||||||||||||| ||||| || |||||||| Sbjct 133491 ATCTGGCAGATGTAC-AAGAAGGCCGAGGCCTCCTTCTGGACGGCGGAGGAGGT 133439 >seq17078 Length=538 Score = 89.7 bits (98), Expect = 7e-12 Identities = 93/122 (76%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 1818122 GGGCACGCCCACCTCGTCAATGTCAATCTCGGGGTCGGGGCTGATGACGGCGCGCGCGGT 1818181 ||| |||||||||| ||| ||| | | | |||||||||| ||||||||| |||||| | Sbjct 136 GGGGACGCCCACCTGGTCGATGGCCAGGTTGGGGTCGGGGGTGATGACGGTGCGCGCCGA 195 Query 1818182 AAAGTTGACGCGCTTGCCCATGCAATTGCCGCGGATCCTGCCCTCCTTGCCCTTGAACCG 1818241 || | || |||||||||||| ||||| || | || || ||||| ||||| | ||| Sbjct 196 GAAATCCACCCGCTTGCCCATGAGGTTGCCCCGCACCCGCCCTTCCTTCCCCTTCAGCCG 255 Query 1818242 CT 1818243 || Sbjct 256 CT 257 >seq1265 Length=67220 Score = 89.7 bits (98), Expect = 7e-12 Identities = 93/122 (76%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 1818122 GGGCACGCCCACCTCGTCAATGTCAATCTCGGGGTCGGGGCTGATGACGGCGCGCGCGGT 1818181 ||| |||||||||| ||| ||| | | | |||||||||| ||||||||| |||||| | Sbjct 24280 GGGGACGCCCACCTGGTCGATGGCCAGGTTGGGGTCGGGGGTGATGACGGTGCGCGCCGA 24339 Query 1818182 AAAGTTGACGCGCTTGCCCATGCAATTGCCGCGGATCCTGCCCTCCTTGCCCTTGAACCG 1818241 || | || |||||||||||| ||||| || | || || ||||| ||||| | ||| Sbjct 24340 GAAATCCACCCGCTTGCCCATGAGGTTGCCCCGCACCCGCCCTTCCTTCCCCTTCAGCCG 24399 Query 1818242 CT 1818243 || Sbjct 24400 CT 24401 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7175156556062726