Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nannopterum_20auritus_20[genbank_20GCA_5F002173455.1_202017-06-06] 27,523 sequences; 1,246,050,644 total letters Query= NC_028379.1 Length=205896 Score E Sequences producing significant alignments: (Bits) Value seq707 212 8e-50 seq92 156 6e-33 seq13757 132 6e-26 >seq707 Length=2308111 Score = 212 bits (234), Expect = 8e-50 Identities = 657/999 (66%), Gaps = 36/999 (4%) Strand=Plus/Plus Query 13611 TACGTGAACATGACGGCCGACTGCGTGGCCTTCGTGAAAGACAGGGGGTATCTCGT-GAG 13669 ||| ||||||||||| |||||| | |||| || || | | || | || | ||| Sbjct 255780 TACCTGAACATGACGAAGGACTGCAGGAGCTTC---AAGGAGACGCGGCAGTTCATCGAG 255836 Query 13670 GCCCC--TGAGCCTGGAAGAGGTCGAGTTTCCCATCGCCTACTCGATCGTGATCCACCAC 13727 ||| |||||| ||| |||| ||||| ||||| |||||||| || || |||||| || Sbjct 255837 TTCCCACTGAGCCAGGAGGAGGCAGAGTTCCCCATTGCCTACTCCATGGTCATCCACAAC 255896 Query 13728 AAGATCGAGATGTTCGAGCGCCTCCTGAGGGCCATCTACGCCCCGCAGAACCTCTACTGC 13787 || ||||||||||||||||| ||||||||| || ||||| |||| |||||| |||||||| Sbjct 255897 AACATCGAGATGTTCGAGCGGCTCCTGAGGTCCCTCTACACCCCCCAGAACGTCTACTGC 255956 Query 13788 GTCCACGTGGACTCCAAGTCCGGCGACGAGTTCATCC---GGGGCGTCTCGGCCATCGCC 13844 ||||||| ||| |||||| || | | || ||| || ||| |||||||| Sbjct 255957 ATCCACGTTGACAGGAAGTCC-CCGGCTA--TCTTCCAGGAGGCCGTGCGGGCCATCGTA 256013 Query 13845 AGGTGCTTCCCTAACGTGGCCCTGGCCCACCGGCTGCACGACGTGGTGTACGGCTCCTGG 13904 |||||||| || | |||| ||| ||| | | ||||| || | ||||||| Sbjct 256014 GCCTGCTTCCCCAATATCTTTGTGGCTAGCCGCCTGGAAAAGGTGGTCTATGCCTCCTGG 256073 Query 13905 AGTCGCGTGCAGGCCGACCTCAGCTGCATGTCGGACCTG--GACGCCTCCCCCGTCAAGT 13962 || ||||||| ||||||| ||||||| ||||||| | | ||| | || | Sbjct 256074 TCCCGGCTGCAGGCAGACCTCAACTGCATGCAGGACCTGTTGCAGAGCCCCATGCCA--T 256131 Query 13963 GGAGGTACCTGCTCAACCTGTGCGGGATGGACTTCCCGCTCAAGACCAACCTGGAGATCG 14022 || || || |||||| ||||| | || ||||| ||||||||||| ||||| | Sbjct 256132 GGCACTATCTCCTCAACACCTGCGGCACCGATTTCCCCATCAAGACCAACGCTGAGATAG 256191 Query 14023 TGCGGGCGCTGAAGGCCCTGGGCGGCAAGAACGCCCTGGAG--AGCGAGGGCATGCCCAA 14080 | | || |||||||| ||| | ||| |||| | ||||| || || | | | | | Sbjct 256192 TCAGCGCCCTGAAGGCGCTGCGGGGCCGGAACAGCATGGAGTCAGAGAAGCCCT--CGGA 256249 Query 14081 CCACAAGC-TGCACCGCATCAGGAAGAGGCACGTGGTGGCCAGCGGCGGCGTGGTGGTCA 14139 | ||||| |||| ||| | | ||| | |||| ||| | | | | Sbjct 256250 CTCCAAGCGGGCACGCTGGCAGTATCA-CCACATAGTGG-----GGCAG-TTCATCTCCC 256302 Query 14140 ACACCGGCAGGAACAAGGCCCCGCCGCCGCTCAGGATCCCCATCTTTGCGGGAAACGCTT 14199 || | || | || ||||| || | || |||||| || |||| || || | Sbjct 256303 GGACAGCCACAGAGAAACTGCCGCCACCCCACAACTCCCCCATGTTCACGGGCAATGCGT 256362 Query 14200 ACTTTGCGGTCACCCGGGAGTTCGTGGACTTCGTCCTCAAGGACGAGCCGGTGGCCCTGC 14259 || | || ||||| |||| |||||| | | | || | || || || | |||| Sbjct 256363 ACATCGCAGTCACACGGGCCTTCGTGCAGTACATCTTTGAGAAC---CCCACAACACTGC 256419 Query 14260 ---TCATGCACTGGTTCGAGGACACGTACAGCCCCGACGAGCACCTGTGGGCCACCGTGC 14316 || | | ||| | ||||||| |||||||| ||||||||| | ||||||||| | Sbjct 256420 AGTTCTTTGAGTGGGCCAAGGACACCTACAGCCCTGACGAGCACATCTGGGCCACCCTCA 256479 Query 14317 AGAGAATGTACGGGACGCCCGGGGGGATCCCCGTTCACGTCAAGTACGACACCTCGGACA 14376 | | ||| || ||| || | ||| | | ||||| | | |||||| | Sbjct 256480 ACCGCATGCCTGGCGTGCCAGGCTCCCTGCCCCAGAATGACAAGTTCCAGCTCTCGGATA 256539 Query 14377 TGTGGGCCAAGGTCAGGTTCGTCAAGTGGCACTACTACGAGGGGGATATCAAGAAAGGGG 14436 || ||| | | | ||||||||||| ||| ||||| || || || || | Sbjct 256540 TGAACGCCCTACCCCGCCTGGTCAAGTGGCAGTACCTGGAGGGCGACCCCAGCAAGGGCG 256599 Query 14437 CCCTGTACCCGCCTTGCGACGGCATCCACGTCCACGCCATCTGCATCTTCGGGTCCGGCG 14496 | | |||||||| ||| |||| ||| | | || ||||||||| |||| |||| Sbjct 256600 CGCCCTACCCGCCCTGCACCGGCCAGCACCAGCGCTCCGTCTGCATCTACGGGGTGGGCG 256659 Query 14497 ACGTGAAGTGGCTG-AAGAGCGTCCCGCACCTGTTCGCCAACAAGTTCGACGACGAGACG 14555 ||||| ||| || ||| | | ||||| || ||||||||||||||| || | | Sbjct 256660 ACGTGCCCTGGATGCTCCAGCAGCAC-CACCTCTTGGCCAACAAGTTCGACCCCGTGGTG 256718 Query 14556 GACGAGTTCGCCGTGCGCTGTCTGGACGAGGACGTGCGC 14594 ||||| |||| | | || ||||| ||| || ||||| Sbjct 256719 GACGACGCCGCCATCCTGTGCCTGGAGGAGTACCTGCGC 256757 >seq92 Length=3866563 Score = 156 bits (172), Expect = 6e-33 Identities = 441/662 (67%), Gaps = 43/662 (6%) Strand=Plus/Plus Query 13671 CCCCTGAGCCTGGAAGAGGTCGAGTTTCCCATCGCCTACTCGATCGTGATCCACCACAAG 13730 || || |||| || |||| || || ||||| |||||| ||| ||| || |||||| Sbjct 1680934 CCTCTCAGCC--GAGGAGGCCGCCTTCCCCATTGCCTAC---ATCATGACCCTGCACAAG 1680988 Query 13731 A---TCGAGATGTTCGAGCGCCTCCTGAGGGCCATCTACGCCCCGCAGAACCTCTACTGC 13787 | |||| |||||||| ||| | ||||| | ||| || || ||| |||||||| Sbjct 1680989 GAGTTTGAGACCTTCGAGCGGCTCTTCAGGGCGGTGTACATGCCCCAAAACATCTACTGC 1681048 Query 13788 GTCCACGTGGACTCCAAGTC--CGGCGACGAGTTCATCCGG--GGCGTCTCGGC-CATCG 13842 |||| |||||| ||||| | |||| | | ||||| |||| |||| | | | Sbjct 1681049 ATCCATGTGGACACCAAGGCACCGGCCCC-----CTTCCGGCAGGCGGTGCGGCGCCTGG 1681103 Query 13843 CCAGGTGCTTCCCTAACGTGGCCCTGGCCCACCGGCTGCACGACGTGGTGTACGGCTCCT 13902 | |||||||| |||| ||| ||| |||| | | ||||| |||||| | Sbjct 1681104 TGGGCTGCTTCCCCAACGCCTTCCTCGCCTCCCGGGCGGAGCGGGTGGTCTACGGCGGCG 1681163 Query 13903 GGAGTCGCGTGCAGGCCGACCTCAGCTGCATGTCGGACCTGGACGCCTCCCCCGTCAAGT 13962 ||| ||| |||||||||| ||||||| |||||| ||||| |||| | Sbjct 1681164 CCTCCCGCCTGCGGGCCGACCTCCACTGCATGAGAGACCTGCTGGCCTCGGCCGTGCCCT 1681223 Query 13963 GGAGGTACCTGCTCAACCTGTGCGGGATGGACTTCCCGCTCAAGACCAACCTGGAGATCG 14022 || | |||||||||||| ||||| ||||||||| | |||||||||| |||||||| Sbjct 1681224 GGCGCTACCTGCTCAACACCTGCGGCCAGGACTTCCCCTTGAAGACCAACCGGGAGATCG 1681283 Query 14023 TGCGGGCGCTGAAGGCCCTGGGCGGCAAGAAC----GCCCTGGAGAGCGAGGGCATGCCC 14078 | | | ||| |||| | | || || |||||| ||| || | || | || ||| Sbjct 1681284 TCCAGCTGCTCAAGGGCTTTGGGGGGAAGAACATCACCCCCGGGGTGC--TGCCA--CCC 1681339 Query 14079 AACCACA-AGCTGCACCGCATCAGGAAGAGGCAC---GTGGTGGCCAG-----CGGCGGC 14129 ||||| |||| ||||| | | |||| | || |||||| || | Sbjct 1681340 CCCCACATCACTGC-CCGCACAAAATATGTGCACAGGGAGGGGGCCAGGCACAATGCCTC 1681398 Query 14130 GTGG-TGGTCAACACCGGCAGGAACAAGGCCCCGCCGCCGCTCAGGATCCCCATCTTTGC 14188 | || || ||| |||| || | ||||||| || ||||| | || || |||||| Sbjct 1681399 GGGGCTGATCACCACCTGCCTGCACAAGGCGCCCCCGCCCCACAACATGACCATCTACTT 1681458 Query 14189 GGGAAACGCTTACTTTGCGGTCACCCGGGAGTTCGTGGACTTCGTCCTCAAGGACGAGC- 14247 || || ||| |||| ||||||||| |||||||| ||||| || ||||| | | Sbjct 1681459 TGGCTCTGCGTACATTGCCGTCACCCGGCCCTTCGTGGAGTTCGTGCTGCAGGACCAACG 1681518 Query 14248 --CGGTGGCCCTGCTCATGCACTGGTTCGAGGACACGTACAGCCCCGACGAGCACCTGTG 14305 | | | ||||| ||| |||| ||||||||| |||||||| || |||||| | || Sbjct 1681519 CGCCATCGATCTGCT--GGCA-TGGTCCGAGGACACCTACAGCCCTGATGAGCACTTCTG 1681575 Query 14306 GG 14307 || Sbjct 1681576 GG 1681577 Score = 132 bits (146), Expect = 6e-26 Identities = 260/380 (68%), Gaps = 16/380 (4%) Strand=Plus/Plus Query 13683 GAAGAGGTCGAGTTTCCCATCGCCTACTCGATCGTGATCCACCACAAGA---TCGAGATG 13739 || |||| || || ||||| |||||| ||| ||| || |||||| | |||| Sbjct 1668938 GAGGAGGCCGCCTTCCCCATTGCCTAC---ATCATGACCCTGCACAAGGAGTTTGAGACC 1668994 Query 13740 TTCGAGCGCCTCCTGAGGGCCATCTACGCCCCGCAGAACCTCTACTGCGTCCACGTGGAC 13799 |||||||| ||| | ||||| | ||| || || ||| |||||||| |||| |||||| Sbjct 1668995 TTCGAGCGGCTCTTCAGGGCGGTGTACATGCCCCAAAACATCTACTGCATCCATGTGGAC 1669054 Query 13800 TCCAAGTC--CGGCGACGAGTTCATCCGG--GGCGTCTCGGC-CATCGCCAGGTGCTTCC 13854 ||||| | |||| | | ||||| |||| |||| | | | | ||||||| Sbjct 1669055 ACCAAGGCACCGGCCCC-----CTTCCGGCAGGCGGTGCGGCGCCTGGTGGGCTGCTTCC 1669109 Query 13855 CTAACGTGGCCCTGGCCCACCGGCTGCACGACGTGGTGTACGGCTCCTGGAGTCGCGTGC 13914 | |||| ||| ||| |||| | | ||||| |||||| | ||| ||| Sbjct 1669110 CCAACGCCTTCCTCGCCTCCCGGGCGGAGCGGGTGGTCTACGGCGGCGCCTCCCGCCTGC 1669169 Query 13915 AGGCCGACCTCAGCTGCATGTCGGACCTGGACGCCTCCCCCGTCAAGTGGAGGTACCTGC 13974 |||||||||| ||||||| |||||| ||||| |||| ||| | ||||||| Sbjct 1669170 GGGCCGACCTCCACTGCATGAGAGACCTGCTGGCCTCGGCCGTGCCCTGGCGCTACCTGC 1669229 Query 13975 TCAACCTGTGCGGGATGGACTTCCCGCTCAAGACCAACCTGGAGATCGTGCGGGCGCTGA 14034 ||||| ||||| ||||||||| | |||||||||| ||||||||| | | ||| | Sbjct 1669230 TCAACACCTGCGGCCAGGACTTCCCCTTGAAGACCAACCGGGAGATCGTCCAGCTGCTCA 1669289 Query 14035 AGGCCCTGGGCGGCAAGAAC 14054 ||| | | || || |||||| Sbjct 1669290 AGGGCTTTGGGGGGAAGAAC 1669309 >seq13757 Length=375 Score = 132 bits (146), Expect = 6e-26 Identities = 260/380 (68%), Gaps = 16/380 (4%) Strand=Plus/Minus Query 13683 GAAGAGGTCGAGTTTCCCATCGCCTACTCGATCGTGATCCACCACAAGA---TCGAGATG 13739 || |||| || || ||||| |||||| ||| ||| || |||||| | |||| Sbjct 375 GAGGAGGCCGCCTTCCCCATTGCCTAC---ATCATGACCCTGCACAAGGAGTTTGAGACC 319 Query 13740 TTCGAGCGCCTCCTGAGGGCCATCTACGCCCCGCAGAACCTCTACTGCGTCCACGTGGAC 13799 |||||||| ||| | ||||| | ||| || || ||| |||||||| |||| |||||| Sbjct 318 TTCGAGCGGCTCTTCAGGGCGGTGTACATGCCCCAAAACATCTACTGCATCCATGTGGAC 259 Query 13800 TCCAAGTC--CGGCGACGAGTTCATCCGG--GGCGTCTCGGC-CATCGCCAGGTGCTTCC 13854 ||||| | |||| | | ||||| |||| |||| | | | | ||||||| Sbjct 258 ACCAAGGCACCGGCCCC-----CTTCCGGCAGGCGGTGCGGCGCCTGGTGGGCTGCTTCC 204 Query 13855 CTAACGTGGCCCTGGCCCACCGGCTGCACGACGTGGTGTACGGCTCCTGGAGTCGCGTGC 13914 | |||| ||| ||| |||| | | ||||| |||||| | ||| ||| Sbjct 203 CCAACGCCTTCCTCGCCTCCCGGGCGGAGCGGGTGGTCTACGGCGGCGCCTCCCGCCTGC 144 Query 13915 AGGCCGACCTCAGCTGCATGTCGGACCTGGACGCCTCCCCCGTCAAGTGGAGGTACCTGC 13974 |||||||||| ||||||| |||||| ||||| |||| ||| | ||||||| Sbjct 143 GGGCCGACCTCCACTGCATGAGAGACCTGCTGGCCTCGGCCGTGCCCTGGCGCTACCTGC 84 Query 13975 TCAACCTGTGCGGGATGGACTTCCCGCTCAAGACCAACCTGGAGATCGTGCGGGCGCTGA 14034 ||||| ||||| ||||||||| | |||||||||| ||||||||| | | ||| | Sbjct 83 TCAACACCTGCGGCCAGGACTTCCCCTTGAAGACCAACCGGGAGATCGTCCAGCTGCTCA 24 Query 14035 AGGCCCTGGGCGGCAAGAAC 14054 ||| | | || || |||||| Sbjct 23 AGGGCTTTGGGGGGAAGAAC 4 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658512569012480