Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nannopterum_20auritus_20[genbank_20GCA_5F002173455.1_202017-06-06] 27,523 sequences; 1,246,050,644 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq20 118 7e-22 >seq20 Length=4226088 Score = 118 bits (130), Expect = 7e-22 Identities = 165/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || || || || |||| ||||| ||| || ||| ||||||||| ||||| || || ||| Sbjct 1306967 CCACCCCTCAGGCGCAGCACCAGATGCAGGGTGGACTCCTTTTGGATGTTGTAGTCGGAA 1306908 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 || || ||| ||||||| || || || || ||||| || || | ||| || || ||||| Sbjct 1306907 AGGGTGCGCCCGTCTTCCAGCTGCTTGCCAGCAAAGATCAACCTCTGCTGATCAGGCGGA 1306848 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCAC 34658 | ||||||||||| |||| || | || || | ||| ||||| | ||| || Sbjct 1306847 ATGCCCTCCTTGTCCTGGATC-TTGGCCTTGACATTCTCAATGGTGTCACTGGGCTCAAC 1306789 Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATG 34707 |||| ||| || || || || || | || |||||||| ||||||||| Sbjct 1306788 CTCCAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACAAAGATCTGCATG 1306740 Score = 114 bits (126), Expect = 8e-21 Identities = 165/230 (72%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 34479 GCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGA 34538 ||| || || || |||| ||||| ||| || ||| |||||| || ||||| || || || Sbjct 1306512 GCCACCCCTCAGGCGCAGCACCAGATGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGA 1306453 Query 34539 AAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGG 34598 ||| || ||| ||||||| || || || || ||||| || || | ||| || || ||||| Sbjct 1306452 AAGGGTGCGCCCGTCTTCCAGCTGCTTGCCAGCAAAGATCAACCTCTGCTGATCAGGCGG 1306393 Query 34599 CACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCA 34657 | ||||||||||| |||| || | || || | ||| ||||| | ||| | Sbjct 1306392 AATGCCCTCCTTGTCCTGGATC-TTGGCCTTGACATTCTCAATGGTGTCACTGGGCTCAA 1306334 Query 34658 CTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATG 34707 | |||| ||| || || || || || | || |||||||| ||||||||| Sbjct 1306333 CCTCCAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACAAAGATCTGCATG 1306284 Score = 114 bits (126), Expect = 8e-21 Identities = 165/230 (72%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 34479 GCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGA 34538 ||| || || || |||| ||||| ||| || ||| |||||| || ||||| || || || Sbjct 1306740 GCCACCCCTCAGGCGCAGCACCAGATGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGA 1306681 Query 34539 AAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGG 34598 ||| || ||| ||||||| || || || || ||||| || || | ||| || || ||||| Sbjct 1306680 AAGGGTGCGCCCGTCTTCCAGCTGCTTGCCAGCAAAGATCAACCTCTGCTGATCAGGCGG 1306621 Query 34599 CACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCA 34657 | ||||||||||| |||| || | || || | ||| ||||| | ||| | Sbjct 1306620 AATGCCCTCCTTGTCCTGGATC-TTGGCCTTGACATTCTCAATGGTGTCACTGGGCTCAA 1306562 Query 34658 CTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATG 34707 | |||| ||| || || || || || | || |||||||| ||||||||| Sbjct 1306561 CCTCCAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACAAAGATCTGCATG 1306512 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 314624028184859