Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nannopterum_20auritus_20[genbank_20GCA_5F002173455.1_202017-06-06] 27,523 sequences; 1,246,050,644 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq44 176 1e-38 seq20 172 1e-37 >seq44 Length=2740361 Score = 176 bits (194), Expect = 1e-38 Identities = 166/212 (78%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || ||||| || || ||||| || || |||||||| || || | ||||| | |||||| Sbjct 712605 AGCACAAGATGGAGGGTGGATTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCATCT 712664 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 |||||||||||||| |||||||| || | || || || || |||| |||||||||||| Sbjct 712665 TCCAGCTGCTTGCCAGCGAAGATCAGCCTCTGCTGATCGGGGGGAATACCTTCCTTGTCC 712724 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| ||||||||| || ||||||||| | ||||||||||| ||||| || Sbjct 712725 TGGATCTTCGCTTTCACGTTCTCAATGGTGTCACTGGGCTCAACCTCGAGGGTGATGGTT 712784 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || || || ||||| ||||| | |||||| Sbjct 712785 TTGCCAGTCAGGGTCTTCACAAAGATCTGCAT 712816 Score = 176 bits (194), Expect = 1e-38 Identities = 168/215 (78%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || ||||| || || ||||| || || |||||||| || || | ||||| | |||||| Sbjct 713061 AGCACAAGATGGAGGGTGGATTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCATCT 713120 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 |||||||||||||| |||||||| || | || || || || |||| |||||||||||| Sbjct 713121 TCCAGCTGCTTGCCAGCGAAGATCAGCCTCTGCTGATCGGGGGGAATGCCTTCCTTGTCC 713180 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 ||||||||| ||||| || || ||||||||| | || |||||||| ||||| ||| Sbjct 713181 TGGATCTTTGCCTTCACATTCTCAATGGTGTCACTGGGCTCGACCTCGAGGGTGATGGTC 713240 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117 || || || || ||||||||||| | |||||| || Sbjct 713241 TTGCCGGTCAGGGTCTTTACAAAGATCTGCATCTT 713275 Score = 167 bits (184), Expect = 5e-36 Identities = 164/212 (77%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || ||||| || ||||| || || || |||||||| || || | ||||| | |||||| Sbjct 712149 AGCACAAGATGGAGAGTAGATTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCT 712208 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 |||||||||||||| || ||||| || | || || || || |||| |||||||||||| Sbjct 712209 TCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCGGGGGGAATGCCTTCCTTGTCC 712268 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 ||||||||| ||||| || || ||||||||| | || |||||||| ||||| ||| Sbjct 712269 TGGATCTTTGCCTTCACATTCTCAATGGTGTCACTGGGCTCGACCTCGAGGGTGATGGTC 712328 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || || || ||||| ||||| | |||||| Sbjct 712329 TTACCGGTCAGGGTCTTCACAAAGATCTGCAT 712360 Score = 167 bits (184), Expect = 5e-36 Identities = 164/212 (77%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || ||||| || || ||||| || || |||||||| ||||| | ||||| | |||||| Sbjct 712377 AGCACAAGATGGAGGGTGGATTCCTTCTGGATGTTGTAATCTGAGAGGGTACGACCATCT 712436 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 |||||||||||||| |||||||| || | || || ||||| |||| |||||||||||| Sbjct 712437 TCCAGCTGCTTGCCAGCGAAGATCAGCCTCTGCTGATCAGGGGGAATGCCTTCCTTGTCC 712496 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 ||||||||| ||||| || || ||||||||| | || ||||| || ||||| ||| Sbjct 712497 TGGATCTTTGCCTTCACATTCTCAATGGTGTCACTGGGCTCGACCTCAAGGGTGATGGTC 712556 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || || | ||||| || || | |||||| Sbjct 712557 TTGCCGGTCAAGGTCTTCACGAAGATCTGCAT 712588 Score = 158 bits (174), Expect = 3e-33 Identities = 162/212 (76%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || ||||| || || ||||| || || |||||||| || || | ||||| | |||||| Sbjct 712833 AGCACAAGATGGAGGGTGGATTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCT 712892 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 |||||||||||||| |||||||| || | || || || || |||| |||||||||||| Sbjct 712893 TCCAGCTGCTTGCCAGCGAAGATCAGCCTCTGCTGATCGGGGGGAATGCCTTCCTTGTCC 712952 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 ||||||||| ||||| || || ||||||||| | || ||||| || ||||| ||| Sbjct 712953 TGGATCTTTGCCTTCACATTCTCAATGGTGTCACTGGGCTCGACCTCAAGGGTGATGGTC 713012 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || || | ||||| || || | |||||| Sbjct 713013 TTGCCGGTCAAGGTCTTCACGAAGATCTGCAT 713044 >seq20 Length=4226088 Score = 172 bits (190), Expect = 1e-37 Identities = 167/215 (78%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || || || ||||||||||| || |||||||| || || | ||||| | || ||| Sbjct 1306268 AGCACCAGATGCAGAGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCGTCT 1306209 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 |||||||||||||| || ||||| || | || || ||||| |||| |||||||||||| Sbjct 1306208 TCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCAGGGGGAATGCCTTCCTTGTCC 1306149 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| || || || || ||||||||| | |||||||| || ||||| ||| Sbjct 1306148 TGGATCTTGGCCTTGACATTCTCAATGGTGTCACTGGGCTCAACCTCCAGGGTGATGGTC 1306089 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117 || ||||| || ||||| ||||| | ||||||||| Sbjct 1306088 TTGCCCGTCAGGGTCTTCACAAAGATCTGCATTTT 1306054 Score = 161 bits (178), Expect = 2e-34 Identities = 163/212 (77%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || || || || |||||||| ||||||||||| || || | |||||| | || ||| Sbjct 1306952 AGCACCAGATGCAGGGTGGACTCCTTTTGGATGTTGTAGTCGGAAAGGGTGCGCCCGTCT 1306893 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 |||||||||||||| || ||||| | | || || ||||| |||| || ||||||||| Sbjct 1306892 TCCAGCTGCTTGCCAGCAAAGATCAACCTCTGCTGATCAGGCGGAATGCCCTCCTTGTCC 1306833 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| || || || || ||||||||| | |||||||| || ||||| ||| Sbjct 1306832 TGGATCTTGGCCTTGACATTCTCAATGGTGTCACTGGGCTCAACCTCCAGGGTGATGGTC 1306773 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || ||||| || ||||| ||||| | |||||| Sbjct 1306772 TTGCCCGTCAGGGTCTTCACAAAGATCTGCAT 1306741 Score = 158 bits (174), Expect = 3e-33 Identities = 162/212 (76%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || || || || |||||||| || |||||||| || || | |||||| | || ||| Sbjct 1306496 AGCACCAGATGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAAAGGGTGCGCCCGTCT 1306437 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 |||||||||||||| || ||||| | | || || ||||| |||| || ||||||||| Sbjct 1306436 TCCAGCTGCTTGCCAGCAAAGATCAACCTCTGCTGATCAGGCGGAATGCCCTCCTTGTCC 1306377 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| || || || || ||||||||| | |||||||| || ||||| ||| Sbjct 1306376 TGGATCTTGGCCTTGACATTCTCAATGGTGTCACTGGGCTCAACCTCCAGGGTGATGGTC 1306317 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || ||||| || ||||| ||||| | |||||| Sbjct 1306316 TTGCCCGTCAGGGTCTTCACAAAGATCTGCAT 1306285 Score = 158 bits (174), Expect = 3e-33 Identities = 162/212 (76%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || || || || |||||||| || |||||||| || || | |||||| | || ||| Sbjct 1306724 AGCACCAGATGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAAAGGGTGCGCCCGTCT 1306665 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 |||||||||||||| || ||||| | | || || ||||| |||| || ||||||||| Sbjct 1306664 TCCAGCTGCTTGCCAGCAAAGATCAACCTCTGCTGATCAGGCGGAATGCCCTCCTTGTCC 1306605 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| || || || || ||||||||| | |||||||| || ||||| ||| Sbjct 1306604 TGGATCTTGGCCTTGACATTCTCAATGGTGTCACTGGGCTCAACCTCCAGGGTGATGGTC 1306545 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || ||||| || ||||| ||||| | |||||| Sbjct 1306544 TTGCCCGTCAGGGTCTTCACAAAGATCTGCAT 1306513 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1158743238449895