Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nannopterum_20auritus_20[genbank_20GCA_5F002173455.1_202017-06-06] 27,523 sequences; 1,246,050,644 total letters Query= NC_030394.2 Length=126965 Score E Sequences producing significant alignments: (Bits) Value seq179 95.1 1e-14 seq195 91.5 1e-13 >seq179 Length=2788308 Score = 95.1 bits (104), Expect = 1e-14 Identities = 125/167 (75%), Gaps = 5/167 (3%) Strand=Plus/Minus Query 30017 AAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTG-TGCTCGAA 30075 || |||||||||||||| || || || || |||| || ||||| || ||| |||| ||| Sbjct 2300176 AAGTGCCTCCACTGGAAACCATAAACTGGCCCCAAATCCCCCTCCTCTCTGGTGCT-GAA 2300118 Query 30076 GCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTC 30135 ||| ||| |||| || || | || || || || ||||| ||||| || ||||| | Sbjct 2300117 ACCCTGCTTATCCAGGAACTCACGCGATCCATTAGCATCCCAAATCTTCACACCCTTGGC 2300058 Query 30136 GGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAG-CAGC 30181 ||||||||||||| ||||| || || || || || ||||| |||| Sbjct 2300057 AGAGAGCTCTTTGGCATTTGTAGAACC-CT-ACAAAACACAGACAGC 2300013 >seq195 Length=492271 Score = 91.5 bits (100), Expect = 1e-13 Identities = 85/108 (79%), Gaps = 0/108 (0%) Strand=Plus/Plus Query 114284 TTAAGCTCCCTGCTGAGGACTACGTTTAGCCTGTCTCTCAGAGGTCTATTCTTTTCGGGG 114343 || |||||||||||||| |||| || | |||||| | | ||| | |||||| || || Sbjct 149570 TTGAGCTCCCTGCTGAGCACTATATTAATTCTGTCTTTTAAAGGACGATTCTTCTCAGGA 149629 Query 114344 ATGGAGAACCAAGTCTTTCTACCCATTATCACCACGTTCTGCTTACCT 114391 ||||||||||| || ||| |||||||||||| | ||||| |||||| Sbjct 149630 ATGGAGAACCAGGTTTTTTTACCCATTATCAGGGCATTCTGTTTACCT 149677 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406026958012378