Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nannopterum_20auritus_20[genbank_20GCA_5F002173455.1_202017-06-06] 27,523 sequences; 1,246,050,644 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq16249 196 5e-45 seq8190 165 8e-36 seq5443 136 4e-27 seq490 116 4e-21 >seq16249 Length=493 Score = 196 bits (216), Expect = 5e-45 Identities = 205/269 (76%), Gaps = 18/269 (7%) Strand=Plus/Plus Query 8352 TGTTGCCCAGGCTGGAGTGCAGTGGCCTGATCTCCGCTCACTGCAACCTCCGCCTCCCGG 8411 |||||| |||| |||||| || |||| |||| |||||||||||| || ||||| ||| Sbjct 218 TGTTGCACAGGGTGGAGTACAATGGCGCCATCTTTGCTCACTGCAACATCTGCCTCACGG 277 Query 8412 GTTCAAGCTATTCTCCTGCCTCAGCCTCCAGAGTAGCTGGGATTACA---------GGCA 8462 || ||||| ||| ||| ||||||||||| |||||||||| |||| | | Sbjct 278 GTCCAAGCGATTGTCCACCCTCAGCCTCCCAGGTAGCTGGGACTACACCACACTGGGACT 337 Query 8463 AAA------GCCACCACGCCAAGCTAATTTTT-GTATTTTTAGTAGAGAGAGGGTTTCAC 8515 | | ||||||| ||| ||||||||||| | ||||||||||| || || ||||||| Sbjct 338 ACACCAGCTGCCACCATGCCTAGCTAATTTTTTGGATTTTTAGTAGTGACAGCGTTTCAC 397 Query 8516 CATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCATGTGATCCACCTGCCTCGGCCTCC 8575 | ||||||||| |||||| || ||| | |||| |||||||| | ||||| ||||||| Sbjct 398 TGTATTGGCCAGGATGGTCTTGATCTCTTCACCT--TGTGATCCCCTTGCCTTGGCCTCC 455 Query 8576 CAAAGTGCTGGGATTACAGGCATGAGCCA 8604 || | |||||||||||||| ||||||| Sbjct 456 AAATTTACTGGGATTACAGGCCTGAGCCA 484 >seq8190 Length=230 Score = 165 bits (182), Expect = 8e-36 Identities = 120/138 (87%), Gaps = 1/138 (1%) Strand=Plus/Plus Query 8360 AGGCTGGAGTGCAGTGGCCTGATCTCCGCTCACTGCAACCTCCGCCTCCCGGGTTCAAGC 8419 |||||||||| ||||| |||| |||||||||||||||| |||||||||||||||| Sbjct 94 AGGCTGGAGTA-AGTGGTACAATCTTGGCTCACTGCAACCTCCACCTCCCGGGTTCAAGC 152 Query 8420 TATTCTCCTGCCTCAGCCTCCAGAGTAGCTGGGATTACAGGCAAAAGCCACCACGCCAAG 8479 ||||| |||||||||||||| | ||||||||||||||||||| | |||||||| ||| | Sbjct 153 GATTCTTCTGCCTCAGCCTCCTGGGTAGCTGGGATTACAGGCACATGCCACCACACCAGG 212 Query 8480 CTAATTTTTGTATTTTTA 8497 ||| |||||||||||||| Sbjct 213 CTACTTTTTGTATTTTTA 230 >seq5443 Length=204 Score = 136 bits (150), Expect = 4e-27 Identities = 109/130 (84%), Gaps = 1/130 (1%) Strand=Plus/Plus Query 8479 GCTAATTTTTGTATTTTTAGTAGAGAGAGGGTTTCACCATGTTGGCCAGGCTGGTCTCGA 8538 ||| || || |||||| |||||||| ||||||| ||| |||||||| ||||||||||| Sbjct 9 GCTCATATTCCTATTTTCAGTAGAGACGGGGTTTCTCCACGTTGGCCACGCTGGTCTCGA 68 Query 8539 ACTCCTGACCTCATGTGATCCACCTGCCTCGGCCTCCCAAAGTGCTGG-GATTACAGGCA 8597 ||||||||||||| |||||| ||| ||| |||||||||||||||||| | |||||| Sbjct 69 ACTCCTGACCTCAAATGATCCGCCTTCCTGGGCCTCCCAAAGTGCTGGAAACGACAGGCC 128 Query 8598 TGAGCCACCG 8607 |||||| ||| Sbjct 129 TGAGCCGCCG 138 >seq490 Length=1639929 Score = 116 bits (128), Expect = 4e-21 Identities = 103/129 (80%), Gaps = 0/129 (0%) Strand=Plus/Plus Query 23533 TCATCCCTACTAATCAATTCATTAGAAAATGTTAATCCTGGCATTAATCCTCGTTTTTTA 23592 ||||| ||||| || | |||||||||||| || | ||| ||||||||||||| ||| || Sbjct 130496 TCATCTCTACTGATAAGTTCATTAGAAAAAGTGAGTCCAGGCATTAATCCTCTTTTCTTC 130555 Query 23593 ATCCAAAATATTGCAGCAAATGATCCGGAAAAGAAAATACCCTCAACAGCCGCAAAGGCC 23652 | |||||| |||| ||||| || || ||||||||||| || || || || ||||| || Sbjct 130556 AGCCAAAAAATTGATGCAAAAGAGCCAGAAAAGAAAATTCCTTCCACTGCTGCAAAAGCT 130615 Query 23653 ACAAGACGT 23661 |||| |||| Sbjct 130616 ACAACACGT 130624 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521308588572200