Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nannopterum_20brasilianus_20[genbank_20GCA_5F002174335.1_202017-06-
06] 266,364 sequences; 1,346,185,690 total letters
Query= NC_001266.1
Length=159857
Score E
Sequences producing significant alignments: (Bits) Value
seq6632 96.9 4e-15
seq16573 89.7 5e-13
>seq6632
Length=32526
Score = 96.9 bits (106), Expect = 4e-15
Identities = 80/98 (82%), Gaps = 0/98 (0%)
Strand=Plus/Minus
Query 16472 ATATACGTATCAATCAGTAAACTGTACATTTCTGAGTGTATGTTCTCTATGGCTATCTGA 16531
|| || || ||||| || | ||||||||||||||| ||||| || || ||||| |||||
Sbjct 7584 ATGTAGGTGTCAATGAGAAGACTGTACATTTCTGAATGTATATTTTCCATGGCAATCTGG 7525
Query 16532 AATCCATAGAAGCATCGAGCCTCCGCTATTTGTACTTC 16569
|| |||||||| || |||||||| | |||||||||||
Sbjct 7524 AAGCCATAGAAACACCGAGCCTCTGTGATTTGTACTTC 7487
Score = 93.3 bits (102), Expect = 4e-14
Identities = 92/119 (77%), Gaps = 0/119 (0%)
Strand=Plus/Minus
Query 16226 TCGTCTCTGCTGATAAGTTCGTTGGAAAAAGTTAACCCTGGCATTTTTCCTCGTTTCTTT 16285
|| ||||| ||||||||||| || |||||||| | || |||||| ||||| ||||||
Sbjct 9692 TCATCTCTACTGATAAGTTCATTAGAAAAAGTGAGTCCAGGCATTAATCCTCTTTTCTTC 9633
Query 16286 AACCAGAATATCGCAGCAAATGACCCCGAAAAGAATATACCCTCAACAGATGCAAAAGC 16344
| ||| || || | ||||| || || |||||||| || || || || | |||||||||
Sbjct 9632 AGCCAAAAAATTGATGCAAAAGAGCCAGAAAAGAAAATTCCTTCCACTGCTGCAAAAGC 9574
>seq16573
Length=30794
Score = 89.7 bits (98), Expect = 5e-13
Identities = 91/119 (76%), Gaps = 0/119 (0%)
Strand=Plus/Plus
Query 16226 TCGTCTCTGCTGATAAGTTCGTTGGAAAAAGTTAACCCTGGCATTTTTCCTCGTTTCTTT 16285
|| |||||||| |||||||| ||||| ||||| | || ||||| || | |||||
Sbjct 23958 TCATCTCTGCTAATAAGTTCATTGGAGAAAGTCAGTCCAGGCATCAGGCCCCTCTTCTTC 24017
Query 16286 AACCAGAATATCGCAGCAAATGACCCCGAAAAGAATATACCCTCAACAGATGCAAAAGC 16344
| ||| ||||| |||||||| || ||||||||||| || || ||||| | ||||| ||
Sbjct 24018 AGCCAAAATATAGCAGCAAAGGAACCCGAAAAGAAGATGCCTTCAACTGCAGCAAAGGC 24076
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 509711620184480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |