Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nannopterum_20brasilianus_20[genbank_20GCA_5F002174335.1_202017-06-
06] 266,364 sequences; 1,346,185,690 total letters
Query= NC_001350.1
Length=112930
Score E
Sequences producing significant alignments: (Bits) Value
seq3407 118 8e-22
seq540 84.2 2e-11
>seq3407
Length=547508
Score = 118 bits (130), Expect = 8e-22
Identities = 92/110 (84%), Gaps = 0/110 (0%)
Strand=Plus/Minus
Query 4290 CTTTAGTTCCTTGCTGAGAACAACATTAATTCTGCCTTTTAAAGGCCGGTTCTTCTCAGG 4349
||| || ||| ||||||| || | |||||||||| |||||||||| || |||||||||||
Sbjct 433892 CTTGAGCTCCCTGCTGAGCACTATATTAATTCTGTCTTTTAAAGGACGATTCTTCTCAGG 433833
Query 4350 AATTGAGAACCAAGTCTTTTTACCCATAATCACTAAATTCTGTTTATCTG 4399
||| |||||||| || ||||||||||| |||| |||||||||| |||
Sbjct 433832 AATGGAGAACCAGGTTTTTTTACCCATTATCAGGGCATTCTGTTTACCTG 433783
>seq540
Length=81673
Score = 84.2 bits (92), Expect = 2e-11
Identities = 108/149 (72%), Gaps = 0/149 (0%)
Strand=Plus/Plus
Query 102033 CTTTATATTCTGCTCCGAAATGCCTCCACTGAAATCCATACACAGGTCCAAGATCTCCTT 102092
|||| ||||||||||| || ||||||||||| || ||||| || || || | ||| || |
Sbjct 26896 CTTTGTATTCTGCTCCAAAGTGCCTCCACTGGAAACCATAAACTGGCCCCAAATCCCCCT 26955
Query 102093 CATCTCTGTCATAAAAACCAAGTTTATCTAAAAATGATCTAGATCCATTCGCATCCCAAA 102152
| |||||| ||||| | ||||| | || | |||||||| ||||||||||
Sbjct 26956 CCTCTCTGGTGCTGAAACCCTGCTTATCCAGGAACTCACGCGATCCATTAGCATCCCAAA 27015
Query 102153 TGTGCACGCCAGCTGCTGATAGCTCTTTG 102181
| | ||| || || || |||||||||
Sbjct 27016 TCTTCACACCCTTGGCAGAGAGCTCTTTG 27044
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 360078466165364
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |