Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nannopterum_20brasilianus_20[genbank_20GCA_5F002174335.1_202017-06- 06] 266,364 sequences; 1,346,185,690 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq540 93.3 5e-14 >seq540 Length=81673 Score = 93.3 bits (102), Expect = 5e-14 Identities = 117/161 (73%), Gaps = 0/161 (0%) Strand=Plus/Plus Query 145750 AGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTAGCTGGCTATGTTGAAGGGC 145809 || ||||||| ||||| | |||||| || ||||| || |||||||| || ||||| ||| Sbjct 23845 AGCCCCGTGACATGGGCAATCATGTATGTAAGCAGTGAATAGCTGGCAATATTGAAAGGC 23904 Query 145810 ACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCAGGAGAGCTCCCCGCCCGCC 145869 || ||||| ||||| || || || | ||| || || ||||| || | || || Sbjct 23905 ACTCCCAGTCCCATATCTCCAGACCTCTGATAGAGTTGGCACGACAATTCACCATTTAGA 23964 Query 145870 ACGTAGAACTGGCACAGGAGGTGGCAGGGCGGCAGGGCCAT 145910 || ||||||||||| || ||||| || |||| ||||| Sbjct 23965 ACATAGAACTGGCAAAGAGCATGGCATGGAGGCAAAGCCAT 24005 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588112109790560