Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nannopterum_20brasilianus_20[genbank_20GCA_5F002174335.1_202017-06-
06] 266,364 sequences; 1,346,185,690 total letters
Query= NC_001731.1
Length=190289
Score E
Sequences producing significant alignments: (Bits) Value
seq534 150 2e-31
seq16560 105 8e-18
>seq534
Length=660954
Score = 150 bits (166), Expect = 2e-31
Identities = 187/256 (73%), Gaps = 0/256 (0%)
Strand=Plus/Plus
Query 83143 GAACTTCTCGAAGTTCCAGGCCACGTCGTTGCGGCACACTGGAGACCAGGCAATGAGCTG 83202
||||||||| |||||||||| | |||||||||||| || || |||||| ||| |||
Sbjct 552574 GAACTTCTCAAAGTTCCAGGAGATGTCGTTGCGGCAGACGGGGGACCAGATGATGTACTG 552633
Query 83203 GGGGTCGCTCACGAGCGTGCTCATGTCGTCGCTAGGCGCCGGCAGGGCCTCTCGTAGGAA 83262
|||| | ||| ||||| | ||||||| || ||||| |||||| |||||
Sbjct 552634 TGGGTTGGTCATGAGCGAGGAGGGGTCGTCGTGCGGGAAAGGCAGCGCCTCTTTCAGGAA 552693
Query 83263 GGCGAAGAGCGGATGTGCCCTTGCACCGTTGACCTCGCACTTCTCGAAGAGCATAAAGTT 83322
|| ||| || || || || | ||||| ||||||||||||||||| | || || |
Sbjct 552694 GGTGAAAAGGGGGTGCGCGTTCTTCCCGTTCACCTCGCACTTCTCGAACATGATGAAATC 552753
Query 83323 CGGCTCGAAGCCGTTCCCAGGACGGACGTGCTTCAGGGAAGGCAAGATCTCGGCATTCTG 83382
|||| | | ||||| |||||||| ||||||| ||| ||| ||| |||||| | ||
Sbjct 552754 GGGCTTGTACCCGTTGCCAGGACGAACGTGCTCCAGCGAAAGCAGGATCTCCTCGTTTGT 552813
Query 83383 GGCGTTTTCCTGGTGA 83398
||| ||||||||| ||
Sbjct 552814 GGCATTTTCCTGGGGA 552829
Score = 84.2 bits (92), Expect = 3e-11
Identities = 93/124 (75%), Gaps = 0/124 (0%)
Strand=Plus/Plus
Query 83391 CCTGGTGACCGAACTGGTTACACGGGAACCCAAGCACTACCAGCCCCCGAGCTCCTAGGC 83450
||||||| |||||||| || || ||||| ||||| || ||||||||| | || ||
Sbjct 552960 CCTGGTGCCCGAACTGATTGCAGGGGAAGCCAAGGACCCGCAGCCCCCGGGGGCCGTAGC 553019
Query 83451 GCCGCTGCAGCTCGTTCATCTGAGTGTACTCCCGGACCGTGCTACCTCAGAGGGACGCTA 83510
|||||||||||||||| | ||| | | || ||| || | |||||||| ||||| |
Sbjct 553020 GCCGCTGCAGCTCGTTGAGCTGCTGGAAGTCGCGGGTGGTTGTGCCTCAGAGCGACGCCA 553079
Query 83511 CGTT 83514
||||
Sbjct 553080 CGTT 553083
>seq16560
Length=21448
Score = 105 bits (116), Expect = 8e-18
Identities = 117/154 (76%), Gaps = 3/154 (2%)
Strand=Plus/Plus
Query 83388 TTTCCTGGTGACCGAACTGGTTACACGGGAACCCAAGCACTACCAGCCCCCGAGCTCCTA 83447
|| |||||| || || ||||| || ||||| || ||||| ||||||| ||| | ||
Sbjct 4123 TTACCTGGTAGCCAAATTGGTTGCAGGGGAAGCCCAGCACGACCAGCCGCCGGGGG--TA 4180
Query 83448 GGCGCCGCTGCAGCTCGTTCATCTGAGTGTACTCCCGGACCGTGCTACCTCAGAGGGACG 83507
| | | ||||||| ||| | ||| || || |||| |||||| |||||||||||||||
Sbjct 4181 GCGGGCT-TGCAGCTGGTTGAGCTGGGTATAATCCCTCACCGTGGTACCTCAGAGGGACG 4239
Query 83508 CTACGTTCTCGATGAGCAAGACCCGGCCCCGTAA 83541
| |||||||| ||||| | || |||||||| ||
Sbjct 4240 CCACGTTCTCAATGAGGACCACGCGGCCCCGGAA 4273
Score = 104 bits (114), Expect = 3e-17
Identities = 218/312 (70%), Gaps = 16/312 (5%)
Strand=Plus/Plus
Query 83056 GAGCAGGGCCTCGATGTCGGGCTCCACGGCCAGGGTCTGG-CA-GCGGTGGCTGTACCTG 83113
||| ||| || |||||| ||||||| || || ||| || |||| ||||||| |
Sbjct 3636 GAGGAGGCGCTGGATGTCAGGCTCCA--GCTGGGCGGTGGGCATGCGGGGGCTGTAGCGC 3693
Query 83114 CGCACGGGCGTGCCGTCAGCACCCACCAAGAACTTCTCGAAGTTCCAGGCCACGTCGTTG 83173
|| | || || || | |||||||| |||||||||||||||||||| | |||| |
Sbjct 3694 CGGAAAGGTTCCCCTTCGGGACCCACCAGGAACTTCTCGAAGTTCCAGGAGATGTCGGAG 3753
Query 83174 CGGCACACTGGAGACCAGGCAATGAGCTGGGGGTCGCTCACGAGC-GTGCTCATGTCGTC 83232
|| | ||| || ||||| | || |||| ||| || || |||| | |||||
Sbjct 3754 CGCCGCACGGGGCTCCAGGTGAGGAAGCGGGGCTCGGCCATCAGATGTGC-CGCCTCGTC 3812
Query 83233 GCTAGGCGCCGGCAGG---GCCTCTCGTAGGAAGGCGAAGAGCGGATG--TGCCCTTGCA 83287
||| | |||||| |||| || ||| |||| |||| || || || ||| ||
Sbjct 3813 AGCCGGCTCAGGCAGGTGAGCCT-TC--AGGTAGGCAAAGACGGGGTGGGTGTCCT-GC- 3867
Query 83288 CCGTTGACCTCGCACTTCTCGAAGAGCATAAAGTTCGGCTCGAAGCCGTTCCCAGGACGG 83347
||||| |||| |||||||| ||||| | ||||| ||||||||||| ||| || ||
Sbjct 3868 CCGTTCACCTGGCACTTCTGAAAGAGGGTGAAGTTGGGCTCGAAGCCACCCCCCGGCCGC 3927
Query 83348 ACGTGCTTCAGG 83359
|| |||||||||
Sbjct 3928 ACATGCTTCAGG 3939
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 606769780614560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |