Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nannopterum_20brasilianus_20[genbank_20GCA_5F002174335.1_202017-06- 06] 266,364 sequences; 1,346,185,690 total letters Query= NC_002229.3 Length=177874 Score E Sequences producing significant alignments: (Bits) Value seq10354 179 4e-40 >seq10354 Length=59808 Score = 179 bits (198), Expect = 4e-40 Identities = 169/214 (79%), Gaps = 21/214 (10%) Strand=Plus/Plus Query 1930 AGGCCGCGGTCGGCCGGCACCC-GCCATTGCCGCCGCGAAGAGTTCGCCTCTGTCAGCCT 1988 |||||||||||||||||| ||| |||||||||||||||||||| ||| |||||||||||| Sbjct 1103 AGGCCGCGGTCGGCCGGCTCCCCGCCATTGCCGCCGCGAAGAGCTCGTCTCTGTCAGCCT 1162 Query 1989 ------CGGCGGCGCCCGGGAGATGCGgcgcgcggccccgcgc----------ccccagc 2032 |||||||| |||||| | || ||| |||||||| ||||||| Sbjct 1163 CGGCGGCGGCGGCGGCCGGGAATGGAGGGAGGCGCCCCCGCGCCCGCGGGGGACCCCAGC 1222 Query 2033 agagcaacacgggagcggcgcccccggggcaa--cccccgcgccccccTGCGCCGTGGG- 2089 ||||||| |||||||||||||| ||||| || || |||||| |||| |||||||| Sbjct 1223 AGAGCAAAACGGGAGCGGCGCCGCCGGGATAAACCCGCCGCGCTTCCCTCAGCCGTGGGG 1282 Query 2090 -GCGCGCGGACGGCGTCGCTCCCACACGCGCGGC 2122 |||||||| ||||| |||||| ||||||||||| Sbjct 1283 CGCGCGCGGCCGGCGCCGCTCCGACACGCGCGGC 1316 Score = 179 bits (198), Expect = 4e-40 Identities = 169/214 (79%), Gaps = 21/214 (10%) Strand=Plus/Minus Query 139498 GCCGCGCGTGTGGGAGCGACGCCGTCCGCGCGC--CCCACGGCGCAggggggcgcggggg 139555 ||||||||||| |||||| ||||| |||||||| |||||||| |||| |||||| || Sbjct 1316 GCCGCGCGTGTCGGAGCGGCGCCGGCCGCGCGCGCCCCACGGCTGAGGGAAGCGCGGCGG 1257 Query 139556 --ttgccccgggggcgccgctcccgtgttgctctgctgggg----------gcgcggggc 139603 || ||||| |||||||||||||| |||||||||||||| |||||||| Sbjct 1256 GTTTATCCCGGCGGCGCCGCTCCCGTTTTGCTCTGCTGGGGTCCCCCGCGGGCGCGGGGG 1197 Query 139604 cgcgcgcCGCATCTCCCGGGCGCCGCCG------AGGCTGACAGAGGCGAACTCTTCGCG 139657 ||| || | |||||| |||||||| |||||||||||| ||| ||||||||| Sbjct 1196 CGCCTCCCTCCATTCCCGGCCGCCGCCGCCGCCGAGGCTGACAGAGACGAGCTCTTCGCG 1137 Query 139658 GCGGCAATGGC-GGGTGCCGGCCGACCGCGGCCT 139690 ||||||||||| ||| |||||||||||||||||| Sbjct 1136 GCGGCAATGGCGGGGAGCCGGCCGACCGCGGCCT 1103 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 567174056976960