Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nannopterum_20brasilianus_20[genbank_20GCA_5F002174335.1_202017-06-
06] 266,364 sequences; 1,346,185,690 total letters
Query= NC_002229.3
Length=177874
Score E
Sequences producing significant alignments: (Bits) Value
seq10354 179 4e-40
>seq10354
Length=59808
Score = 179 bits (198), Expect = 4e-40
Identities = 169/214 (79%), Gaps = 21/214 (10%)
Strand=Plus/Plus
Query 1930 AGGCCGCGGTCGGCCGGCACCC-GCCATTGCCGCCGCGAAGAGTTCGCCTCTGTCAGCCT 1988
|||||||||||||||||| ||| |||||||||||||||||||| ||| ||||||||||||
Sbjct 1103 AGGCCGCGGTCGGCCGGCTCCCCGCCATTGCCGCCGCGAAGAGCTCGTCTCTGTCAGCCT 1162
Query 1989 ------CGGCGGCGCCCGGGAGATGCGgcgcgcggccccgcgc----------ccccagc 2032
|||||||| |||||| | || ||| |||||||| |||||||
Sbjct 1163 CGGCGGCGGCGGCGGCCGGGAATGGAGGGAGGCGCCCCCGCGCCCGCGGGGGACCCCAGC 1222
Query 2033 agagcaacacgggagcggcgcccccggggcaa--cccccgcgccccccTGCGCCGTGGG- 2089
||||||| |||||||||||||| ||||| || || |||||| |||| ||||||||
Sbjct 1223 AGAGCAAAACGGGAGCGGCGCCGCCGGGATAAACCCGCCGCGCTTCCCTCAGCCGTGGGG 1282
Query 2090 -GCGCGCGGACGGCGTCGCTCCCACACGCGCGGC 2122
|||||||| ||||| |||||| |||||||||||
Sbjct 1283 CGCGCGCGGCCGGCGCCGCTCCGACACGCGCGGC 1316
Score = 179 bits (198), Expect = 4e-40
Identities = 169/214 (79%), Gaps = 21/214 (10%)
Strand=Plus/Minus
Query 139498 GCCGCGCGTGTGGGAGCGACGCCGTCCGCGCGC--CCCACGGCGCAggggggcgcggggg 139555
||||||||||| |||||| ||||| |||||||| |||||||| |||| |||||| ||
Sbjct 1316 GCCGCGCGTGTCGGAGCGGCGCCGGCCGCGCGCGCCCCACGGCTGAGGGAAGCGCGGCGG 1257
Query 139556 --ttgccccgggggcgccgctcccgtgttgctctgctgggg----------gcgcggggc 139603
|| ||||| |||||||||||||| |||||||||||||| ||||||||
Sbjct 1256 GTTTATCCCGGCGGCGCCGCTCCCGTTTTGCTCTGCTGGGGTCCCCCGCGGGCGCGGGGG 1197
Query 139604 cgcgcgcCGCATCTCCCGGGCGCCGCCG------AGGCTGACAGAGGCGAACTCTTCGCG 139657
||| || | |||||| |||||||| |||||||||||| ||| |||||||||
Sbjct 1196 CGCCTCCCTCCATTCCCGGCCGCCGCCGCCGCCGAGGCTGACAGAGACGAGCTCTTCGCG 1137
Query 139658 GCGGCAATGGC-GGGTGCCGGCCGACCGCGGCCT 139690
||||||||||| ||| ||||||||||||||||||
Sbjct 1136 GCGGCAATGGCGGGGAGCCGGCCGACCGCGGCCT 1103
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 567174056976960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |