Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nannopterum_20brasilianus_20[genbank_20GCA_5F002174335.1_202017-06-
06] 266,364 sequences; 1,346,185,690 total letters
Query= NC_002641.1
Length=159160
Score E
Sequences producing significant alignments: (Bits) Value
seq1066 259 5e-64
>seq1066
Length=3223403
Score = 259 bits (286), Expect = 5e-64
Identities = 308/421 (73%), Gaps = 1/421 (0%)
Strand=Plus/Minus
Query 125093 CCCGTGCCGTGCTTACCCATCCGCCGTGCTCCCGCAACCACTCGCCCTGCTCTTCGGCCA 125152
||||| || ||| ||||||||||||||| || || |||||||||| |||| |||||||
Sbjct 524893 CCCGTCCCC-GCTCACCCATCCGCCGTGCGCCTCCAGCCACTCGCCCCGCTCCTCGGCCA 524835
Query 125153 GGTACGCGGCCAGCGCTGCGGCCAAGCGGCTTGGCCCTTCCTCACAGCCGTTTTCGTACA 125212
|||| |||||||||||| || ||| ||||| ||||| || | ||||| ||| ||
Sbjct 524834 GGTAGGCGGCCAGCGCTTCGACCAGGCGGCGCGGCCCGTCGCCGCAGCCCCGCTCGGCCA 524775
Query 125213 GCGCCGTTGCCAGCGAGCCGCCGAGGACTATGGTCGCCAGGCATCGACCCCAGTTGAAGC 125272
|||| | ||||||| |||| ||| ||| | |||||| || |||||||||| ||
Sbjct 524774 GCGCGGCGGCCAGCGTGCCGGCGAAGACCACCAGCGCCAGCAGCCGGCCCCAGTTGAGGC 524715
Query 125273 CGCTTCCGGAGTTCAATTCAGACACCACACTTTGCAGCGCCGACAACGCTGCCTGCGTGC 125332
||| ||| | || || | | |||| | |||| || | ||| || |||
Sbjct 524714 CGCCGTCGGCCTCCAGTTGCGCCGCCACCCGCCCCAGCAGCGCCGCCGCCTCCCGCGGCT 524655
Query 125333 CGCCGCTCGCTAACGGCGCGCAGGAGCGAAAGAAGGGCCTCTCTCGCCGCTCCAGCTCGG 125392
|| | | ||| | ||||||||||||||| |||||||||| ||||||||||||||||||||
Sbjct 524654 CGGCCCGCGCCAGCGGCGCGCAGGAGCGGAAGAAGGGCCGCTCTCGCCGCTCCAGCTCGG 524595
Query 125393 CCGCCGCTCGCCGNNNNNNNNNNNNNGTAGGACTCGGCGGCGGCCCTTCCTTGCCGCAGC 125452
||||||| ||||| || || || || ||| |||| | ||| | ||
Sbjct 524594 CCGCCGCCCGCCGCAGCGCGGCCGCCGTGGGGCTGGGGGGCAGCCCGGCGCCGCCACCGC 524535
Query 125453 AGTGCTGGAAGTAATCCTCCAGCAGCAACGCCGTTTCTTCCTTCAGGGAGTCAGCCATGG 125512
||||||||||| ||||||||||||| |||||| || |||||||| ||| | | |||||
Sbjct 524534 GATGCTGGAAGTAGTCCTCCAGCAGCAGCGCCGTCTCCTCCTTCAGCGAGCCCGGCATGG 524475
Query 125513 C 125513
|
Sbjct 524474 C 524474
Score = 250 bits (276), Expect = 3e-61
Identities = 306/421 (73%), Gaps = 1/421 (0%)
Strand=Plus/Plus
Query 157083 GCCATGGCTGACTCCCTGAAGGAAGAAACGGCGTTGCTGCTGGAGGATTACTTCCAGCAC 157142
|||||| | | ||| |||||||| || |||||| ||||||||||||| |||||||||||
Sbjct 524474 GCCATGCCGGGCTCGCTGAAGGAGGAGACGGCGCTGCTGCTGGAGGACTACTTCCAGCAT 524533
Query 157143 TGCTGCGGCAAGGAAGGGCCGCCGCCGAGTCCTACGGCGGCAGAGCTGCGGCGAGCNNNN 157202
|| | ||| | |||| ||| || || || |||||||| | ||||||||| ||
Sbjct 524534 CGCGGTGGCGGCGCCGGGCTGCCCCCCAGCCCCACGGCGGCCGCGCTGCGGCGGGCGGCG 524593
Query 157203 NNNNNNNNNGAGCGGCGAGAGAGGCCCTTCTTTCGCTCCTGCGCGCCGTTAGCGAGCGGC 157262
|||||||||||| |||||||||| ||||||||||||||| | ||| | | |
Sbjct 524594 GCCGAGCTGGAGCGGCGAGAGCGGCCCTTCTTCCGCTCCTGCGCGCCGCTGGCGCGGGCC 524653
Query 157263 GGCACGCAGGCAGCGTTGTCGGCGCTGCAAAGTGTGGTGTCTGAATTGAACTCCGGAAGC 157322
| ||| || ||| | || |||| | |||| | | || || | ||| ||
Sbjct 524654 GAGCCGCGGGAGGCGGCGGCGCTGCTGGGGCGGGTGGCGGCGCAACTGGAGGCCGACGGC 524713
Query 157323 GGCTTCAACTGGGGTCGATGCCTGGCGACCATAGTCCTCGGCGGCTCGCTGGCAACGGCG 157382
||| |||||||||| || |||||| | ||| ||| |||| ||||||| | |||
Sbjct 524714 GGCCTCAACTGGGGCCGGCTGCTGGCGCTGGTGGTCTTCGCCGGCACGCTGGCCGCCGCG 524773
Query 157383 CTGTACGAAAACGGCTGTGAGGAAGGGCCAAGCCGCTTGGCCGCAGCGCTGGCCGCGTAC 157442
||| ||| ||||| | || ||||| ||||| ||| || |||||||||||| |||
Sbjct 524774 CTGGCCGAGCGGGGCTGCGGCGACGGGCCGCGCCGCCTGGTCGAAGCGCTGGCCGCCTAC 524833
Query 157443 CTGGCCGAAGAGCAGGGCGAGTGGTTGCGGGAGCACGGCGGATGGGTAAGCACGGCACGG 157502
|||||||| |||| |||||||||| || || ||||||||||||||| ||| || ||||
Sbjct 524834 CTGGCCGAGGAGCGGGGCGAGTGGCTGGAGGCGCACGGCGGATGGGTGAGC-GGGGACGG 524892
Query 157503 G 157503
|
Sbjct 524893 G 524893
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 507488646412800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |