Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nannopterum_20brasilianus_20[genbank_20GCA_5F002174335.1_202017-06-
06] 266,364 sequences; 1,346,185,690 total letters
Query= NC_004002.1
Length=149955
Score E
Sequences producing significant alignments: (Bits) Value
seq6632 123 2e-23
seq16573 111 2e-19
>seq6632
Length=32526
Score = 123 bits (136), Expect = 2e-23
Identities = 109/136 (80%), Gaps = 0/136 (0%)
Strand=Plus/Minus
Query 13894 CCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGttttt 13953
||||||||||||| |||||||| || ||||| || | ||| ||||| ||||||| ||| |
Sbjct 9694 CCTCATCTCTACTGATAAGTTCATTAGAAAAAGTGAGTCCAGGCATTAATCCTCTTTTCT 9635
Query 13954 ttAACCAAAATATTGCAGCAAATGACCCGGAAAAGAATATTCCCTCAACTGCAGCAAACG 14013
| | |||||| |||| ||||| || || |||||||| ||||| || ||||| ||||| |
Sbjct 9634 TCAGCCAAAAAATTGATGCAAAAGAGCCAGAAAAGAAAATTCCTTCCACTGCTGCAAAAG 9575
Query 14014 CTATTAATCGTTCTCC 14029
||| | ||||||||
Sbjct 9574 CTACAACACGTTCTCC 9559
>seq16573
Length=30794
Score = 111 bits (122), Expect = 2e-19
Identities = 97/121 (80%), Gaps = 0/121 (0%)
Strand=Plus/Plus
Query 13894 CCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGttttt 13953
|||||||||| ||||||||||| || || || || | ||| ||||||| || | || |
Sbjct 23956 CCTCATCTCTGCTAATAAGTTCATTGGAGAAAGTCAGTCCAGGCATCAGGCCCCTCTTCT 24015
Query 13954 ttAACCAAAATATTGCAGCAAATGACCCGGAAAAGAATATTCCCTCAACTGCAGCAAACG 14013
| | ||||||||| |||||||| || || |||||||| || || |||||||||||||| |
Sbjct 24016 TCAGCCAAAATATAGCAGCAAAGGAACCCGAAAAGAAGATGCCTTCAACTGCAGCAAAGG 24075
Query 14014 C 14014
|
Sbjct 24076 C 24076
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 478130721637600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |