Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nannopterum_20brasilianus_20[genbank_20GCA_5F002174335.1_202017-06- 06] 266,364 sequences; 1,346,185,690 total letters Query= NC_004062.1 Length=119217 Score E Sequences producing significant alignments: (Bits) Value seq12144 82.4 6e-11 >seq12144 Length=38566 Score = 82.4 bits (90), Expect = 6e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 42882 GCCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGA 42941 ||| || | ||| | | ||| | ||||| ||| ||||| || | ||||| ||||| Sbjct 1366 GCCACCCCTCAGGCGCAGCACAAGATGGAGAGTAGATTCCTTCTGGATGTTGTAGTCGGA 1307 Query 42942 CAATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGG 43001 || || || | || |||| || ||||||||||| |||| | ||| ||||||| || Sbjct 1306 CAGGGTGCGGCCATCTTCCAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGATCGGGGGG 1247 Query 43002 CACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGAC 43061 | ||||| || || |||| | || || | ||| ||||| | | |||||| Sbjct 1246 AATGCCTTCCTTGTCCTGGATCTTTGCCTTCACATTCTCAATGGTGTCACTGGGCTCGAC 1187 Query 43062 GTCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109 || | || || || || ||||| || || |||||||| || ||||| Sbjct 1186 CTCGAGGGTGATGGTCTTACCGGTCAGGGTCTTCACAAAGATCTGCAT 1139 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 380131555577112