Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nannopterum_20brasilianus_20[genbank_20GCA_5F002174335.1_202017-06-
06] 266,364 sequences; 1,346,185,690 total letters
Query= NC_004156.2
Length=231621
Score E
Sequences producing significant alignments: (Bits) Value
seq16573 87.8 3e-12
seq132962 84.2 3e-11
>seq16573
Length=30794
Score = 87.8 bits (96), Expect = 3e-12
Identities = 80/101 (79%), Gaps = 0/101 (0%)
Strand=Plus/Minus
Query 125421 GACAGACTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCC 125480
|| ||| |||| || || || || || || |||||||||||||||||| ||||| ||
Sbjct 24088 GAGAGAGTGGTTGCCTTTGCTGCAGTTGAAGGCATCTTCTTTTCGGGTTCCTTTGCTGCT 24029
Query 125481 ATCTTTTGGCTCAAGAAGCGCGGACTCATGCCCGGACTGAC 125521
|| |||||||| |||||| | || || ||||| ||||||||
Sbjct 24028 ATATTTTGGCTGAAGAAGAGGGGCCTGATGCCTGGACTGAC 23988
>seq132962
Length=249
Score = 84.2 bits (92), Expect = 3e-11
Identities = 72/89 (81%), Gaps = 0/89 (0%)
Strand=Plus/Minus
Query 124998 TTTCCCATCAGGTATCATGACATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGG 125057
||||||||| ||| ||||| || ||| | |||||||| || || ||||||||||||||
Sbjct 89 TTTCCCATCGAGTACCATGATATCTGGCAGATGTACAAGAAAGCCGAGGCCTCCTTTTGG 30
Query 125058 ACGGTCGAAGAGGTCGATCTGTCCAAGGA 125086
|| | ||| ||||| || || ||||||||
Sbjct 29 ACTGCCGAGGAGGTGGACCTTTCCAAGGA 1
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 738591806340640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |