Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nannopterum_20brasilianus_20[genbank_20GCA_5F002174335.1_202017-06- 06] 266,364 sequences; 1,346,185,690 total letters Query= NC_006966.1 Length=166259 Score E Sequences producing significant alignments: (Bits) Value seq6632 107 2e-18 >seq6632 Length=32526 Score = 107 bits (118), Expect = 2e-18 Identities = 111/144 (77%), Gaps = 1/144 (1%) Strand=Plus/Minus Query 21490 ATGCAAACCTTCATCCCTACTTATTAATTCATTAGAAAATGTTAAACCGGGCATTAATCC 21549 || || |||| |||| ||||| || | |||||||||||| || | || ||||||||||| Sbjct 9701 ATTCATACCT-CATCTCTACTGATAAGTTCATTAGAAAAAGTGAGTCCAGGCATTAATCC 9643 Query 21550 TCTCTTTTTTAACCAAAATATTGACGCAAATGCTCCTGAAAAGAAAATGCCCTCAACGGC 21609 ||| || || | |||||| ||||| ||||| | || ||||||||||| || || || || Sbjct 9642 TCTTTTCTTCAGCCAAAAAATTGATGCAAAAGAGCCAGAAAAGAAAATTCCTTCCACTGC 9583 Query 21610 AGCAAATGCAACTAATCGTTCACC 21633 ||||| || || | ||||| || Sbjct 9582 TGCAAAAGCTACAACACGTTCTCC 9559 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 530129809691360