Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nannopterum_20brasilianus_20[genbank_20GCA_5F002174335.1_202017-06-
06] 266,364 sequences; 1,346,185,690 total letters
Query= NC_008035.3
Length=126629
Score E
Sequences producing significant alignments: (Bits) Value
seq21304 107 2e-18
seq12144 105 5e-18
>seq21304
Length=31350
Score = 107 bits (118), Expect = 2e-18
Identities = 154/215 (72%), Gaps = 4/215 (2%)
Strand=Plus/Plus
Query 16723 CAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTC 16782
||| |||| |||||| ||||||||||| || ||||||||||||| | ||| ||||
Sbjct 142 CAGCACCAGATGCAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAAAGGGTGCGCCCGTC 201
Query 16783 CTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC 16842
|||| || ||||| ||| | || |||| ||| || || || | |||||| |||||
Sbjct 202 TTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCAGGCGGAATGCCCTCCTTGTC 261
Query 16843 --GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATG 16900
|| || || ||| || | | | ||||| | |||||| |||| |||||||
Sbjct 262 CTGGATCTTGGC--CTTGACATTCTCAATGGTGTCACTGGGCTCAACCTCCAGGGTGATG 319
Query 16901 GTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935
|| || || ||||| || || ||||| ||||||||
Sbjct 320 GTCTTGCCCGTCAGGGTCTTCACAAAGATCTGCAT 354
Score = 104 bits (114), Expect = 2e-17
Identities = 155/218 (71%), Gaps = 4/218 (2%)
Strand=Plus/Plus
Query 16723 CAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTC 16782
||| |||| |||||| ||||||||||| || ||||||||||| | || ||| | ||
Sbjct 370 CAGCACCAGATGCAGAGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATC 429
Query 16783 CTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC 16842
|||| || ||||| ||| | || |||| ||| || || || | ||| || |||||
Sbjct 430 TTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCAGGGGGAATGCCTTCCTTGTC 489
Query 16843 --GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATG 16900
|| || || ||| || | | | ||||| | |||||| |||| |||||||
Sbjct 490 CTGGATCTTGGC--CTTGACATTCTCAATGGTGTCACTGGGCTCAACCTCCAGGGTGATG 547
Query 16901 GTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATTTT 16938
|| || || ||||| || || ||||| |||||||||||
Sbjct 548 GTCTTGCCCGTCAGGGTCTTCACAAAGATCTGCATTTT 585
>seq12144
Length=38566
Score = 105 bits (116), Expect = 5e-18
Identities = 156/219 (71%), Gaps = 4/219 (2%)
Strand=Plus/Minus
Query 16723 CAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTC 16782
||| || | ||| || ||||| ||||| || ||||||||||||| || ||| | | ||
Sbjct 439 CAGCACAAGATGGAGGGTGGATTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATC 380
Query 16783 CTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC 16842
|||| || ||||| ||| | || |||| ||| || || || | ||| || |||||
Sbjct 379 TTCCAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGATCGGGGGGAATGCCTTCCTTGTC 320
Query 16843 --GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATG 16900
|| ||||| |||||| | | | ||||| | |||||| || | |||||||
Sbjct 319 CTGGATCTTTGC--CTTCACATTCTCAATGGTGTCACTGGGCTCGACCTCGAGGGTGATG 262
Query 16901 GTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATTTTG 16939
|| || |||||||| || || ||||| |||||||| |||
Sbjct 261 GTCTTGCCGGTCAGGGTCTTTACAAAGATCTGCATCTTG 223
Score = 98.7 bits (108), Expect = 8e-16
Identities = 152/215 (71%), Gaps = 4/215 (2%)
Strand=Plus/Minus
Query 16723 CAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTC 16782
||| || | ||| || || || ||||| || ||||||||||||| || ||| | | ||
Sbjct 1351 CAGCACAAGATGGAGAGTAGATTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATC 1292
Query 16783 CTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC 16842
|||| || ||||| ||| | || |||| ||| || || || | ||| || |||||
Sbjct 1291 TTCCAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGATCGGGGGGAATGCCTTCCTTGTC 1232
Query 16843 --GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATG 16900
|| ||||| |||||| | | | ||||| | |||||| || | |||||||
Sbjct 1231 CTGGATCTTTGC--CTTCACATTCTCAATGGTGTCACTGGGCTCGACCTCGAGGGTGATG 1174
Query 16901 GTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935
|| || |||||||| || || ||||| ||||||||
Sbjct 1173 GTCTTACCGGTCAGGGTCTTCACAAAGATCTGCAT 1139
Score = 95.1 bits (104), Expect = 1e-14
Identities = 151/215 (70%), Gaps = 4/215 (2%)
Strand=Plus/Minus
Query 16723 CAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTC 16782
||| || | ||| || ||||| ||||| || ||||||||||||| || ||| | | ||
Sbjct 667 CAGCACAAGATGGAGGGTGGATTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATC 608
Query 16783 CTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC 16842
|||| || ||||| || | || |||| ||| || || || | ||| || |||||
Sbjct 607 TTCCAGCTGCTTGCCAGCGAAGATCAGCCTCTGCTGATCGGGGGGAATGCCTTCCTTGTC 548
Query 16843 --GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATG 16900
|| ||||| |||||| | | | ||||| | |||||| || | |||||||
Sbjct 547 CTGGATCTTTGC--CTTCACATTCTCAATGGTGTCACTGGGCTCGACCTCAAGGGTGATG 490
Query 16901 GTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935
|| || ||||||| || || ||||| ||||||||
Sbjct 489 GTCTTACCGGTCAAGGTCTTCACAAAGATCTGCAT 455
Score = 86.0 bits (94), Expect = 5e-12
Identities = 149/215 (69%), Gaps = 4/215 (2%)
Strand=Plus/Minus
Query 16723 CAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTC 16782
||| || | ||| || ||||| ||||| || ||||||||||| | || ||| | | ||
Sbjct 895 CAGCACAAGATGGAGGGTGGATTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCATC 836
Query 16783 CTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC 16842
|||| || ||||| || | || |||| ||| || || || | || || |||||
Sbjct 835 TTCCAGCTGCTTGCCAGCGAAGATCAGCCTCTGCTGATCGGGGGGAATACCTTCCTTGTC 776
Query 16843 --GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATG 16900
|| || ||| ||||| | | | ||||| | |||||| || | |||||||
Sbjct 775 CTGGATCTTCGCT--TTCACGTTCTCAATGGTGTCACTGGGCTCAACCTCGAGGGTGATG 718
Query 16901 GTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935
||||| || ||||| || || ||||| ||||||||
Sbjct 717 GTTTTGCCAGTCAGGGTCTTCACAAAGATCTGCAT 683
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 403772958268360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |