Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nannopterum_20brasilianus_20[genbank_20GCA_5F002174335.1_202017-06- 06] 266,364 sequences; 1,346,185,690 total letters Query= NC_008520.2 Length=132239 Score E Sequences producing significant alignments: (Bits) Value seq12144 84.2 2e-11 >seq12144 Length=38566 Score = 84.2 bits (92), Expect = 2e-11 Identities = 156/229 (68%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 111187 ATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111246 ||||| || ||||| || || |||| ||||||||||| ||| | || || ||||| Sbjct 683 ATGCAGATCTTTGTGAAGACCCTGACTGGCAAAACCATCACCCTCGAGGTTGAGCCCAGT 742 Query 111247 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111306 || | ||| | || ||| || || ||||| ||||| ||||| |||||| Sbjct 743 GACACCATTGAGAACGTGAAAGCGAAGATCCAGGACAAGGAAGGTATTCCCCCCGATCAG 802 Query 111307 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111366 || ||||| || | || ||||| || |||||||| || || | || || || Sbjct 803 CAGAGGCTGATCTTCGCTGGCAAGCAGCTGGAAGATGGCCGCACCCTGTCTGACTACAAC 862 Query 111367 ATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGGCA 111415 || || || ||||| || || ||| | ||| |||| ||| | ||||||| Sbjct 863 ATCCAGAAGGAATCCACCCTCCATCTTGTGCTGCGCCTGAGGGGTGGCA 911 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421666680488800